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The map label for this gene is rstA [H]

Identifier: 117921745

GI number: 117921745

Start: 3969110

End: 3969832

Strand: Direct

Name: rstA [H]

Synonym: Shewana3_3307

Alternate gene names: 117921745

Gene position: 3969110-3969832 (Clockwise)

Preceding gene: 117921744

Following gene: 117921746

Centisome position: 79.83

GC content: 48.41

Gene sequence:

>723_bases
ATGACAAGCGCGCCAATGCCTGAACCCTTATCGCAAATCCTGTTAATTGAAGACGACCAACCCCTTGCCGAACTGGTCTG
CACTTATTTAACCCAAGAAGGTTACAAGCTTATCCATTTAGATAATGCCGAAGACGCGCTGATCCGCCGGGATACCGATG
AGTTTGATCTGATCATTTGCGATGTCATGCTGCCAGGGCAAGATGGCTTTAGTATTTACCCGCAGTTAGCGGCGAGTTAT
CCCTGCCCGATTATCTTCCTGACGGCGCTCGATAATCATGCCGACCAAATTCGGGGATTAAATCTTGGCGCCTGCGATTA
CTTGCTCAAACCCGTAGTGCCGCCTTTACTGCTGGCACGGATTAAGGCCAATCTGCGCAAACAGCAATCCAGCAGTAGCC
GCAGTAAACTTAAGTTACACGACCTATTTTTAGACCCCAACCTACAGCAAGTGAATCTGGGTGATGAAGCCTTATCTTTT
ACCACTAAGGAGTTTTCACTGCTGTGGATCTTCGCTCTGCACGCCGGCAAAGTGCTGTCGCGGGAGTTTTTGTTCGAGCA
ACTCGTGGGCCGCGAATATGATGGTTTAGACAGGGCTATCGACTTAAAAATCAGCCGCCTACGTAAACGTTTAGATGAGC
TGAATGTACCGGGACTGGCCATAACGACTATTCATGGGAAAGGTTATTTATTCAATTACTTGCCAACCCAAGGTCGGACC
TAA

Upstream 100 bases:

>100_bases
ATCCCAAAAACAATAGCTTAGTGACCACAGCATTAGTCAAAGTCGCTAAGTTTGAACCCGCCAACCCCAGAAGACGTCGT
GGACTGAACTGGAACTTATT

Downstream 100 bases:

>100_bases
TCCAAATGAAATTTCAGTTCTACCGCTTGTTTATCTTTTTACTGCTGTCCTGCGGAATCGTGATCTGGAGCTTTGGTCAG
CTCGCCGAGCATTTCGCCCA

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTSAPMPEPLSQILLIEDDQPLAELVCTYLTQEGYKLIHLDNAEDALIRRDTDEFDLIICDVMLPGQDGFSIYPQLAASY
PCPIIFLTALDNHADQIRGLNLGACDYLLKPVVPPLLLARIKANLRKQQSSSSRSKLKLHDLFLDPNLQQVNLGDEALSF
TTKEFSLLWIFALHAGKVLSREFLFEQLVGREYDGLDRAIDLKISRLRKRLDELNVPGLAITTIHGKGYLFNYLPTQGRT

Sequences:

>Translated_240_residues
MTSAPMPEPLSQILLIEDDQPLAELVCTYLTQEGYKLIHLDNAEDALIRRDTDEFDLIICDVMLPGQDGFSIYPQLAASY
PCPIIFLTALDNHADQIRGLNLGACDYLLKPVVPPLLLARIKANLRKQQSSSSRSKLKLHDLFLDPNLQQVNLGDEALSF
TTKEFSLLWIFALHAGKVLSREFLFEQLVGREYDGLDRAIDLKISRLRKRLDELNVPGLAITTIHGKGYLFNYLPTQGRT
>Mature_239_residues
TSAPMPEPLSQILLIEDDQPLAELVCTYLTQEGYKLIHLDNAEDALIRRDTDEFDLIICDVMLPGQDGFSIYPQLAASYP
CPIIFLTALDNHADQIRGLNLGACDYLLKPVVPPLLLARIKANLRKQQSSSSRSKLKLHDLFLDPNLQQVNLGDEALSFT
TKEFSLLWIFALHAGKVLSREFLFEQLVGREYDGLDRAIDLKISRLRKRLDELNVPGLAITTIHGKGYLFNYLPTQGRT

Specific function: Member of the two-component regulatory system rstB/rstA [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI145693140, Length=237, Percent_Identity=35.4430379746835, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI87082012, Length=220, Percent_Identity=37.7272727272727, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1789809, Length=229, Percent_Identity=37.9912663755458, Blast_Score=141, Evalue=3e-35,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=35.2422907488987, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1786784, Length=221, Percent_Identity=34.841628959276, Blast_Score=128, Evalue=4e-31,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=34.9344978165939, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1788394, Length=236, Percent_Identity=31.7796610169492, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=31.9634703196347, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1790860, Length=219, Percent_Identity=32.4200913242009, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790552, Length=221, Percent_Identity=31.6742081447964, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790863, Length=229, Percent_Identity=31.0043668122271, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1786911, Length=223, Percent_Identity=29.1479820627803, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=28.6343612334802, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787229, Length=229, Percent_Identity=28.82096069869, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 27053; Mature: 26921

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAPMPEPLSQILLIEDDQPLAELVCTYLTQEGYKLIHLDNAEDALIRRDTDEFDLIIC
CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCCCCEEEEE
DVMLPGQDGFSIYPQLAASYPCPIIFLTALDNHADQIRGLNLGACDYLLKPVVPPLLLAR
EEEECCCCCCEECHHHHCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
IKANLRKQQSSSSRSKLKLHDLFLDPNLQQVNLGDEALSFTTKEFSLLWIFALHAGKVLS
HHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
REFLFEQLVGREYDGLDRAIDLKISRLRKRLDELNVPGLAITTIHGKGYLFNYLPTQGRT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCC
>Mature Secondary Structure 
TSAPMPEPLSQILLIEDDQPLAELVCTYLTQEGYKLIHLDNAEDALIRRDTDEFDLIIC
CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCHHHCCCCCCCEEEEE
DVMLPGQDGFSIYPQLAASYPCPIIFLTALDNHADQIRGLNLGACDYLLKPVVPPLLLAR
EEEECCCCCCEECHHHHCCCCCCEEEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
IKANLRKQQSSSSRSKLKLHDLFLDPNLQQVNLGDEALSFTTKEFSLLWIFALHAGKVLS
HHHHHHHHHCCCCCCEEEEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
REFLFEQLVGREYDGLDRAIDLKISRLRKRLDELNVPGLAITTIHGKGYLFNYLPTQGRT
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1495392 [H]