| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921725
Identifier: 117921725
GI number: 117921725
Start: 3931413
End: 3933701
Strand: Direct
Name: 117921725
Synonym: Shewana3_3287
Alternate gene names: NA
Gene position: 3931413-3933701 (Clockwise)
Preceding gene: 117921720
Following gene: 117921726
Centisome position: 79.07
GC content: 50.37
Gene sequence:
>2289_bases ATGGCTATAGGGATATGCAGAGTAATTTGTACCACTCTTACGCTCACGGTTGGGTTAACGGCGTGCGATAGTGCGGGCTC CAATAAATCGGGGGGCATCCCCAGCGCACGCGAATATCAGGTGATTTCGACCCTCAGCATCAATGACGGTATTGAAACCC AAAAGAACATGCAGGGGCGCGTGCTACTGAATTACCAGTTGCAGGATGCTCAGGGTAAAGCGACCAGCTTAACCACACCA TTGGCCAATGATGCCCACTTCTTCGTTCAGCCGAGCCTGATGCAATTAAGCGATCACGCCCTGCCTATCCCCATCAGCAA TATCGATCCAAAAAACAGTGGCAAAGAACTCACCTCCATCATTCAAGCGGGCTTTAATCTCGAGCTGAAAAATGGTGACA ACAATCGGCTCACGCCCGTTACCCAGATAAATCAAAAGGATATCGCCGAGCTATTTAACCGCTGGACGAGCCTTAAGTCC CTATTTGAGCAATCGCCAACCCTGCCCGTGCAGCTTGAGCCCCGCGTGGGTTATAGCACCAGCGCCCCCATGGATGAGCG GTTAATCTGGACGGTTGAGCAAGTCAGCGACGATAGATTGCTGGCGGTGCTACAGAATAAACAGCAACTGGGCGAAAACA CTAACCTTAAGGTCTACGGCAAATTCGAGCTTAACCGTAAAACCGGTTGGTTAGAGAGCATGGCGCTATTTAAACAGGAT GAACAGCGGGGAAGAACCTTTATCCAGCGCATCGTTATGGCGCCTAAGGATCGCCCCGATGTGATGAGCCTACTTTGGTA TGCCGATGACAACTACGATGCCGAGCGGGATATCGATGATAAGCAAAAGGAGCTTTATCCCATCAGCGATGTGCCGCGGG AATATAAGCCTACCGACAAGGCATTTATCCAATCCTTATTAGCTGATCATCAAGGGATTATTGATAATATTGGCGACTGG GGCAGCGATACTCCCGAGGAGATCCAACTGCGCTTTGTGCATGCCATGAGCCCGCAATATGTGGTCGGCAATATGCGCTA TGAGGATATCACCGCCTTTGATGAGAGCGGAAAAGCGTTAGATCTCAACTTCTGGCAACACAGCACGGGGGCGGCGGTTA ATTTCAGCCGCAACATTGAGTCGTCGACCAATATTATCGCCACGGGTTGGGATAACACCGCCGATAAACTCAAGCGGATG AGCTATATCAGCGCTAAGCTCACCTTAGTCCCTGAGACGAATAACATCATCGAAAAATCCTGGGATGAACTGCTCGCTTC GCCCTATACCTTTGGCGATGCCAGCCTCACGATTCAGCCCCTAGATGCCAACGCTAAGCTCTTTAAAGTGGTCATCAAGC AGAGCGACAGCCACAAGATCCACCTAGATCTTCAGCAGTTAACAGGCAAAATGGCCCATGCCCGCGCCGAGTCGGAGTAT CCAGAGTGGCTCACCCTGACCGATAAAGAACTGCTAGCGGAGTTGGCTGGTGCCGATGAGAGTCATCCGCTGACGACCAG CGCACTGCTGCTTAAGTTAGACGAAATCCCAAAAAACCTAGTATTAGTGACGAGTCAACCCCAGCCAGAACTCAGCCAAA GCAAGCAGATCCGTTTTGTGCCCGAAGCCGAGTATAACCAAAATCTTGCCAATCCCCTGAGTGAGTTTGGCAGTGTCAGT ATAGGTGACTCCTTCTCGGATAAATTGGCGTTGTCCAAGCCAGAAATCAGTGCGGTGAAGGATATAAAAACGGCGACTGA AAATGGTCACAACTTATATATCCCCATGTCTGCTGCGTTAGCGACGGCCTGTAAGCCCGAAATAGCACAAGGTTTTAATG AAGGCACACAGGCGGTGACTTGGCAGTTTGTGCCCAATGGACCCGAAGGCGCGGCTTACCATTTGATGACGCCCGACCGC GTGCGCCAGTACTTCTACGATAGGCGCATTCAAGGCACTATCCATTGCAAAGGCGATATCCACTGGCAAACCTTGGCGCA ATCCGTCACCGAACGCCCTTGGTTAATCGATTTGCAAACCTGGCTGACCGATACGGGTTATGGCAAGGAGCCGAGTAAAG ATTTACCCAATTACATCAGAGTCGAGAATGCTCAAGGCAAGCCACTAACGATTCGTTTGCCCGAAGAGACAGAGTATAGG ATTGATGAAGTACTGTTAGATGGCCGCTATTTAAGTGTTACGGGCGCCGCCGCTAAGGTGAGTTATATGACTATCTCCCA AGATGCTGTCGATATTCCCTATGAATTCACCTTTAAACCTTTGCCTTAA
Upstream 100 bases:
>100_bases TGAGCTTTTTATTCCCTAGGGGCTTTTTTGTGTATAATGTCGCCAATTTTCGGATTAATAGATTTACATTTCAATAACAT AAGTTGCCAATGGAGTTCAG
Downstream 100 bases:
>100_bases GGAGCGGTTATGCGTCCATTTACTGTAAAACTGCTCCTAGGAGCACTCGCCCTCATCAGTACCCATGCCAATGCAGAGAA GGTATTACTCGATGCCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 762; Mature: 761
Protein sequence:
>762_residues MAIGICRVICTTLTLTVGLTACDSAGSNKSGGIPSAREYQVISTLSINDGIETQKNMQGRVLLNYQLQDAQGKATSLTTP LANDAHFFVQPSLMQLSDHALPIPISNIDPKNSGKELTSIIQAGFNLELKNGDNNRLTPVTQINQKDIAELFNRWTSLKS LFEQSPTLPVQLEPRVGYSTSAPMDERLIWTVEQVSDDRLLAVLQNKQQLGENTNLKVYGKFELNRKTGWLESMALFKQD EQRGRTFIQRIVMAPKDRPDVMSLLWYADDNYDAERDIDDKQKELYPISDVPREYKPTDKAFIQSLLADHQGIIDNIGDW GSDTPEEIQLRFVHAMSPQYVVGNMRYEDITAFDESGKALDLNFWQHSTGAAVNFSRNIESSTNIIATGWDNTADKLKRM SYISAKLTLVPETNNIIEKSWDELLASPYTFGDASLTIQPLDANAKLFKVVIKQSDSHKIHLDLQQLTGKMAHARAESEY PEWLTLTDKELLAELAGADESHPLTTSALLLKLDEIPKNLVLVTSQPQPELSQSKQIRFVPEAEYNQNLANPLSEFGSVS IGDSFSDKLALSKPEISAVKDIKTATENGHNLYIPMSAALATACKPEIAQGFNEGTQAVTWQFVPNGPEGAAYHLMTPDR VRQYFYDRRIQGTIHCKGDIHWQTLAQSVTERPWLIDLQTWLTDTGYGKEPSKDLPNYIRVENAQGKPLTIRLPEETEYR IDEVLLDGRYLSVTGAAAKVSYMTISQDAVDIPYEFTFKPLP
Sequences:
>Translated_762_residues MAIGICRVICTTLTLTVGLTACDSAGSNKSGGIPSAREYQVISTLSINDGIETQKNMQGRVLLNYQLQDAQGKATSLTTP LANDAHFFVQPSLMQLSDHALPIPISNIDPKNSGKELTSIIQAGFNLELKNGDNNRLTPVTQINQKDIAELFNRWTSLKS LFEQSPTLPVQLEPRVGYSTSAPMDERLIWTVEQVSDDRLLAVLQNKQQLGENTNLKVYGKFELNRKTGWLESMALFKQD EQRGRTFIQRIVMAPKDRPDVMSLLWYADDNYDAERDIDDKQKELYPISDVPREYKPTDKAFIQSLLADHQGIIDNIGDW GSDTPEEIQLRFVHAMSPQYVVGNMRYEDITAFDESGKALDLNFWQHSTGAAVNFSRNIESSTNIIATGWDNTADKLKRM SYISAKLTLVPETNNIIEKSWDELLASPYTFGDASLTIQPLDANAKLFKVVIKQSDSHKIHLDLQQLTGKMAHARAESEY PEWLTLTDKELLAELAGADESHPLTTSALLLKLDEIPKNLVLVTSQPQPELSQSKQIRFVPEAEYNQNLANPLSEFGSVS IGDSFSDKLALSKPEISAVKDIKTATENGHNLYIPMSAALATACKPEIAQGFNEGTQAVTWQFVPNGPEGAAYHLMTPDR VRQYFYDRRIQGTIHCKGDIHWQTLAQSVTERPWLIDLQTWLTDTGYGKEPSKDLPNYIRVENAQGKPLTIRLPEETEYR IDEVLLDGRYLSVTGAAAKVSYMTISQDAVDIPYEFTFKPLP >Mature_761_residues AIGICRVICTTLTLTVGLTACDSAGSNKSGGIPSAREYQVISTLSINDGIETQKNMQGRVLLNYQLQDAQGKATSLTTPL ANDAHFFVQPSLMQLSDHALPIPISNIDPKNSGKELTSIIQAGFNLELKNGDNNRLTPVTQINQKDIAELFNRWTSLKSL FEQSPTLPVQLEPRVGYSTSAPMDERLIWTVEQVSDDRLLAVLQNKQQLGENTNLKVYGKFELNRKTGWLESMALFKQDE QRGRTFIQRIVMAPKDRPDVMSLLWYADDNYDAERDIDDKQKELYPISDVPREYKPTDKAFIQSLLADHQGIIDNIGDWG SDTPEEIQLRFVHAMSPQYVVGNMRYEDITAFDESGKALDLNFWQHSTGAAVNFSRNIESSTNIIATGWDNTADKLKRMS YISAKLTLVPETNNIIEKSWDELLASPYTFGDASLTIQPLDANAKLFKVVIKQSDSHKIHLDLQQLTGKMAHARAESEYP EWLTLTDKELLAELAGADESHPLTTSALLLKLDEIPKNLVLVTSQPQPELSQSKQIRFVPEAEYNQNLANPLSEFGSVSI GDSFSDKLALSKPEISAVKDIKTATENGHNLYIPMSAALATACKPEIAQGFNEGTQAVTWQFVPNGPEGAAYHLMTPDRV RQYFYDRRIQGTIHCKGDIHWQTLAQSVTERPWLIDLQTWLTDTGYGKEPSKDLPNYIRVENAQGKPLTIRLPEETEYRI DEVLLDGRYLSVTGAAAKVSYMTISQDAVDIPYEFTFKPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85298; Mature: 85167
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIGICRVICTTLTLTVGLTACDSAGSNKSGGIPSAREYQVISTLSINDGIETQKNMQGR CCCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE VLLNYQLQDAQGKATSLTTPLANDAHFFVQPSLMQLSDHALPIPISNIDPKNSGKELTSI EEEEEEEECCCCCCCEECCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHHHH IQAGFNLELKNGDNNRLTPVTQINQKDIAELFNRWTSLKSLFEQSPTLPVQLEPRVGYST HHCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC SAPMDERLIWTVEQVSDDRLLAVLQNKQQLGENTNLKVYGKFELNRKTGWLESMALFKQD CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHH EQRGRTFIQRIVMAPKDRPDVMSLLWYADDNYDAERDIDDKQKELYPISDVPREYKPTDK HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHH AFIQSLLADHQGIIDNIGDWGSDTPEEIQLRFVHAMSPQYVVGNMRYEDITAFDESGKAL HHHHHHHHHCCCHHHCCCCCCCCCHHHEEEEEEEECCCCEEECCCEECCEEEECCCCCEE DLNFWQHSTGAAVNFSRNIESSTNIIATGWDNTADKLKRMSYISAKLTLVPETNNIIEKS EEEEEECCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHEEEEEEEECCCCHHHHHH WDELLASPYTFGDASLTIQPLDANAKLFKVVIKQSDSHKIHLDLQQLTGKMAHARAESEY HHHHHCCCCEECCCEEEEEECCCCHHEEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCC PEWLTLTDKELLAELAGADESHPLTTSALLLKLDEIPKNLVLVTSQPQPELSQSKQIRFV CCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEC PEAEYNQNLANPLSEFGSVSIGDSFSDKLALSKPEISAVKDIKTATENGHNLYIPMSAAL CCCHHCCHHHHHHHHHCCEECCCCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEHHHHH ATACKPEIAQGFNEGTQAVTWQFVPNGPEGAAYHLMTPDRVRQYFYDRRIQGTIHCKGDI HHHCCHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCC HWQTLAQSVTERPWLIDLQTWLTDTGYGKEPSKDLPNYIRVENAQGKPLTIRLPEETEYR HHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHH IDEVLLDGRYLSVTGAAAKVSYMTISQDAVDIPYEFTFKPLP HHHEEECCEEEEEECCCEEEEEEEECCCCCCCCEEEEECCCC >Mature Secondary Structure AIGICRVICTTLTLTVGLTACDSAGSNKSGGIPSAREYQVISTLSINDGIETQKNMQGR CCHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCE VLLNYQLQDAQGKATSLTTPLANDAHFFVQPSLMQLSDHALPIPISNIDPKNSGKELTSI EEEEEEEECCCCCCCEECCCCCCCCEEEECCHHHHHCCCCCCCCCCCCCCCCCHHHHHHH IQAGFNLELKNGDNNRLTPVTQINQKDIAELFNRWTSLKSLFEQSPTLPVQLEPRVGYST HHCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCC SAPMDERLIWTVEQVSDDRLLAVLQNKQQLGENTNLKVYGKFELNRKTGWLESMALFKQD CCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHH EQRGRTFIQRIVMAPKDRPDVMSLLWYADDNYDAERDIDDKQKELYPISDVPREYKPTDK HHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHH AFIQSLLADHQGIIDNIGDWGSDTPEEIQLRFVHAMSPQYVVGNMRYEDITAFDESGKAL HHHHHHHHHCCCHHHCCCCCCCCCHHHEEEEEEEECCCCEEECCCEECCEEEECCCCCEE DLNFWQHSTGAAVNFSRNIESSTNIIATGWDNTADKLKRMSYISAKLTLVPETNNIIEKS EEEEEECCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHHHHEEEEEEEECCCCHHHHHH WDELLASPYTFGDASLTIQPLDANAKLFKVVIKQSDSHKIHLDLQQLTGKMAHARAESEY HHHHHCCCCEECCCEEEEEECCCCHHEEEEEEECCCCCEEEEEHHHHHHHHHHHHCCCCC PEWLTLTDKELLAELAGADESHPLTTSALLLKLDEIPKNLVLVTSQPQPELSQSKQIRFV CCEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEC PEAEYNQNLANPLSEFGSVSIGDSFSDKLALSKPEISAVKDIKTATENGHNLYIPMSAAL CCCHHCCHHHHHHHHHCCEECCCCCCCCEECCCCCHHHHHHHHHHCCCCCEEEEEHHHHH ATACKPEIAQGFNEGTQAVTWQFVPNGPEGAAYHLMTPDRVRQYFYDRRIQGTIHCKGDI HHHCCHHHHHCCCCCCCEEEEEECCCCCCCCEEECCCHHHHHHHHHHCCCCEEEEECCCC HWQTLAQSVTERPWLIDLQTWLTDTGYGKEPSKDLPNYIRVENAQGKPLTIRLPEETEYR HHHHHHHHHHCCCEEEEHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCHH IDEVLLDGRYLSVTGAAAKVSYMTISQDAVDIPYEFTFKPLP HHHEEECCEEEEEECCCEEEEEEEECCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA