| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921703
Identifier: 117921703
GI number: 117921703
Start: 3907665
End: 3908021
Strand: Direct
Name: 117921703
Synonym: Shewana3_3265
Alternate gene names: NA
Gene position: 3907665-3908021 (Clockwise)
Preceding gene: 117921702
Following gene: 117921704
Centisome position: 78.59
GC content: 51.82
Gene sequence:
>357_bases ATGCCCCTGATAGCAGAACAAACAGCCGAAGCCTTAGTGCAAGCCCAGTTAGTCGCCTATAACCAGCACGACCTTGCAAG CTTTGTGGCGCTCTTTAGCGACGACGTTTGTATTTATCGCCCACCCACCACAGAGCCCGTGATCCGAGGCAAGGCTGCCT TTAGTGATTTCTATCAGAATGAACGTTTTAACTTGCCGCATCTGCACGCCGAGATCCTCAATCGTATGGTGGTCGGCAAT AAAGTGGTCGATCACGAACGGATCAGCGGCATCCGCGAGGAGCCCTTTGAAGTCATGGTGGTCTTTGAAGTCTCTAATGG CCTTATCCAAGCGATGTGGAGCTTTGCCGCTAACTAG
Upstream 100 bases:
>100_bases ATAATAAGCGTTGAAAAGCCCTTTCTCGTTAACCTTGACGGGCTAACGTCTCTTGTCAGATTCAGCCCCTATTTTGAAGG AAGATAGCTTGAGCCAGCAA
Downstream 100 bases:
>100_bases GGCGAGCTCTAAATGGCCATATCAAGCTGACTAGCGTAGCAACAATCATCTGCGGCAAAGGCGCTCGCCAAAGCGGTGAA AAATGTTACGCCTATCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Protein
Number of amino acids: Translated: 118; Mature: 117
Protein sequence:
>118_residues MPLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQNERFNLPHLHAEILNRMVVGN KVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN
Sequences:
>Translated_118_residues MPLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQNERFNLPHLHAEILNRMVVGN KVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN >Mature_117_residues PLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQNERFNLPHLHAEILNRMVVGNK VVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN
Specific function: Unknown
COG id: COG4538
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13335; Mature: 13204
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQN CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCHHCCHHHHHHHHCC ERFNLPHLHAEILNRMVVGNKVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN CCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure PLIAEQTAEALVQAQLVAYNQHDLASFVALFSDDVCIYRPPTTEPVIRGKAAFSDFYQN CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCHHCCHHHHHHHHCC ERFNLPHLHAEILNRMVVGNKVVDHERISGIREEPFEVMVVFEVSNGLIQAMWSFAAN CCCCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA