| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921699
Identifier: 117921699
GI number: 117921699
Start: 3903292
End: 3903663
Strand: Reverse
Name: 117921699
Synonym: Shewana3_3261
Alternate gene names: NA
Gene position: 3903663-3903292 (Counterclockwise)
Preceding gene: 117921700
Following gene: 117921698
Centisome position: 78.51
GC content: 45.97
Gene sequence:
>372_bases ATGACCGATAGTCAAAAATTACTTATTAATCAAATTGATGTAATTAACGCCGCTCTGGCTAAAAAGTCTGCGGCTAAGGT GTACAAGGAGTTCATTATGCGTACTAAAAACGTCGATCTTGGTCTGCTGATGTCATCAAAATTGTTTGGTGTTCTGGCCT TAGCCTTACTGGTGGTGGCGGTTGAGCTGGGCATAGGTGAGGCCAACAGCTGGTTTTTCCTCGGCTTAAATATTTTGGAA TGGACGAATCCCCTAGAAGAAGCGCGCCAGGTGGGTGATGTCTCGATGGAAAGTGTGAGCTTTATATTCGCCTGTCTCAA TGGGTTGTTCGATGCCTTGAGTGGGTTTGTGATGGGCCGTTTTGCGGGGTAA
Upstream 100 bases:
>100_bases TGAGTCTGGTGGAAGTGATCGAAGGCGGTAAAGCGGGTGACGAATGGGTGATCTCCAGTGTTGAGCCCTTCAACCATGCC GAACAGGTCAAAATGCATTG
Downstream 100 bases:
>100_bases GGGCTTTGTGTAGCCTTTACCACTTAAAGATAAGAAACTTGCGCGTTTTATAAGCCGTTTGCGCGCAAAGATAAAAATTA ATCAAGGAAATTAAAATGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MTDSQKLLINQIDVINAALAKKSAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVAVELGIGEANSWFFLGLNILE WTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGFVMGRFAG
Sequences:
>Translated_123_residues MTDSQKLLINQIDVINAALAKKSAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVAVELGIGEANSWFFLGLNILE WTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGFVMGRFAG >Mature_122_residues TDSQKLLINQIDVINAALAKKSAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVAVELGIGEANSWFFLGLNILEW TNPLEEARQVGDVSMESVSFIFACLNGLFDALSGFVMGRFAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13377; Mature: 13246
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSQKLLINQIDVINAALAKKSAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VELGIGEANSWFFLGLNILEWTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGFVMGR HHHCCCCCCCEEEEECHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FAG CCC >Mature Secondary Structure TDSQKLLINQIDVINAALAKKSAAKVYKEFIMRTKNVDLGLLMSSKLFGVLALALLVVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VELGIGEANSWFFLGLNILEWTNPLEEARQVGDVSMESVSFIFACLNGLFDALSGFVMGR HHHCCCCCCCEEEEECHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FAG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA