| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is csgG [H]
Identifier: 117921691
GI number: 117921691
Start: 3894848
End: 3895654
Strand: Reverse
Name: csgG [H]
Synonym: Shewana3_3253
Alternate gene names: 117921691
Gene position: 3895654-3894848 (Counterclockwise)
Preceding gene: 117921692
Following gene: 117921688
Centisome position: 78.35
GC content: 49.81
Gene sequence:
>807_bases ATGACTCGTTTAGTGTTTATCGCCCTGATGCTGCTGAGTATGTCAGCCTGTAGTTTGATCCCAAAGCCTGACTTAAATAT CACGCCCGCTCAAGTTAATCCGATGAGTGAGGTGATGAAAGGGCTACAGAATCAGCCTGGGCCTAAGTTTCCTATCCCTG TGGCCGTGTATTCATTTCGCGACCAAACGGGCCAGTATAAGCCTCAGGCGAACGTGAGTTCATTCTCTACTGCGGTTACA CAAGGGGCGACATCGATGCTGATGCAAACCTTGATTGACTCTAAATGGTTTACGCCCGTTGAGCGTGAGGGCCTGCAAAA CCTACTGACCGAGCGCAAAATCAGCAACAAACAAAATGGTACTAAGGGTGATGATATTCCAGTGTTATCGACGGCGAGAT TGCTATTAGAAGGCGGTATTATCAGCTACGAGACCAACACCAGCACCGGCGGCACAGGGGTGGAATACTATGGCATCGGC GCCTCGGAAATGTACCGTGAGGATTTAGTCACTATCTATCTGCGCGCGGTCGATGTGCACACGGGGAAAGTGATGATGTC TGTATCTACGAGTAAAAGGGTACTTTCGCAGGAAATGCGTGCAGGTCTGTTCCGCTATACCAGTTTGAATCGTTTGGCCG AGGCGGAAGTCGGTTTTACCACTAACGAGCCAGTGCAATTTTGCGTGTTGCAGGCTATCGAACTCGCGGTTGCCGAGTTG ATTGATAAGGGCATTAAGCAAGGTTATTGGAGTCAGGCTCAGGTGAGACAACCCGCTGAAAGACAGCAGGAGTTGAGCCA AGGTTAA
Upstream 100 bases:
>100_bases AAGTGGCTTCCACTGGCACAGGGGTGATGCTGACCATCACCAATATCGAAACCGGTGAAGTGACAGTGATTGAAATGCCA ACTTTCGGAGGCGGAAACTA
Downstream 100 bases:
>100_bases TTCCCGTTGCGATAACAAGCACCGAGCCAGCGACATGTCTGGCTCGGTTTTTTTATGGTTAATCGGCCTGTAATGCCTTC CAAAACAGTGCAAAGCTGGC
Product: curli production assembly/transport component CsgG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 268; Mature: 267
Protein sequence:
>268_residues MTRLVFIALMLLSMSACSLIPKPDLNITPAQVNPMSEVMKGLQNQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLIDSKWFTPVEREGLQNLLTERKISNKQNGTKGDDIPVLSTARLLLEGGIISYETNTSTGGTGVEYYGIG ASEMYREDLVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEL IDKGIKQGYWSQAQVRQPAERQQELSQG
Sequences:
>Translated_268_residues MTRLVFIALMLLSMSACSLIPKPDLNITPAQVNPMSEVMKGLQNQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVT QGATSMLMQTLIDSKWFTPVEREGLQNLLTERKISNKQNGTKGDDIPVLSTARLLLEGGIISYETNTSTGGTGVEYYGIG ASEMYREDLVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEL IDKGIKQGYWSQAQVRQPAERQQELSQG >Mature_267_residues TRLVFIALMLLSMSACSLIPKPDLNITPAQVNPMSEVMKGLQNQPGPKFPIPVAVYSFRDQTGQYKPQANVSSFSTAVTQ GATSMLMQTLIDSKWFTPVEREGLQNLLTERKISNKQNGTKGDDIPVLSTARLLLEGGIISYETNTSTGGTGVEYYGIGA SEMYREDLVTIYLRAVDVHTGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAELI DKGIKQGYWSQAQVRQPAERQQELSQG
Specific function: May be involved in the biogenesis of curli organelles [H]
COG id: COG1462
COG function: function code M; Uncharacterized protein involved in formation of curli polymers
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CsgG family [H]
Homologues:
Organism=Escherichia coli, GI1787274, Length=272, Percent_Identity=45.5882352941176, Blast_Score=221, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005534 [H]
Pfam domain/function: PF03783 CsgG [H]
EC number: NA
Molecular weight: Translated: 29541; Mature: 29410
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLVFIALMLLSMSACSLIPKPDLNITPAQVNPMSEVMKGLQNQPGPKFPIPVAVYSFR CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLIDSKWFTPVEREGLQNLLTERKISNKQNG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDIPVLSTARLLLEGGIISYETNTSTGGTGVEYYGIGASEMYREDLVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEC TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSQAQVRQPAERQQELSQG HHHHHHHCCCCHHHHCCHHHHHHHHHCC >Mature Secondary Structure TRLVFIALMLLSMSACSLIPKPDLNITPAQVNPMSEVMKGLQNQPGPKFPIPVAVYSFR HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEHH DQTGQYKPQANVSSFSTAVTQGATSMLMQTLIDSKWFTPVEREGLQNLLTERKISNKQNG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC TKGDDIPVLSTARLLLEGGIISYETNTSTGGTGVEYYGIGASEMYREDLVTIYLRAVDVH CCCCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHEEC TGKVMMSVSTSKRVLSQEMRAGLFRYTSLNRLAEAEVGFTTNEPVQFCVLQAIELAVAEL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IDKGIKQGYWSQAQVRQPAERQQELSQG HHHHHHHCCCCHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA