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The map label for this gene is uidR [C]

Identifier: 117921690

GI number: 117921690

Start: 3894187

End: 3894789

Strand: Direct

Name: uidR [C]

Synonym: Shewana3_3252

Alternate gene names: 117921690

Gene position: 3894187-3894789 (Clockwise)

Preceding gene: 117921689

Following gene: 117921701

Centisome position: 78.32

GC content: 47.76

Gene sequence:

>603_bases
ATGTCGACCATATTATCAACAGACACTAAACCCATGACGGATAAACGTCAGGCCATTTTGGAGACCGCCTTACGCTTATT
TGTCGACCAAGGGTTTCATGGCACCTCGACCGCATCGATAGCCAAGCAGGCGGGCGTCGCCACAGGCACTCTCTTCCATC
ATTTTCCGACCAAGGAAGCACTGATGGAAAACCTGTTTCTTACCATCAAGCAAGAATTTGCCAATGCCTTGTTGTTACAG
GTCGGCGAGGGGCAAGATCTTAAGCACAATGCCGAAACACTCTGGCAGAGTGCGATCGATTGGTCGATTGAAAATCCAGT
CAAACAGTTGTTTTTTCAGCAGTATTCTATGTCGCCGCAGATAGCACTGCATATTCGCGAGCAGGCGATGAACAGCATCC
TAGGCTTTATCGCGCAATTGATAAAACAGGGGCAACTGATGGGGTTGATTGCTCACTATCCCGTTGATTTGATGCTTGAA
AACTGTCACGGCCAATACTTGGCCGCCACGCGCTTTTTTATCGATAATCCAGCATTAGGCAAAGATAAACATTACCGCGA
TGCCAGCTTTGCACTGTTTTGGAAGGCATTACAGGCCGATTAA

Upstream 100 bases:

>100_bases
CTTCAACACGGGTAAGTTTGTCCATCCTCCCTATGGCACTTTTATCCAACGCATGTTGATGAAGCTGTTTTTACGCTAAT
ACGGGCGCTTAGGAGTAGTT

Downstream 100 bases:

>100_bases
CCATAAAAAAACCGAGCCAGACATGTCGCTGGCTCGGTGCTTGTTATCGCAACGGGAATTAACCTTGGCTCAACTCCTGC
TGTCTTTCAGCGGGTTGTCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Regulatory Protein; Regulatory Protein TetR; TetR Family Transcriptional Regulator Member; TetR-Family Transcriptional Regulator; Transcriptional Regulator TetR; HTH-Type Transcriptional Regulator TetR Family

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MSTILSTDTKPMTDKRQAILETALRLFVDQGFHGTSTASIAKQAGVATGTLFHHFPTKEALMENLFLTIKQEFANALLLQ
VGEGQDLKHNAETLWQSAIDWSIENPVKQLFFQQYSMSPQIALHIREQAMNSILGFIAQLIKQGQLMGLIAHYPVDLMLE
NCHGQYLAATRFFIDNPALGKDKHYRDASFALFWKALQAD

Sequences:

>Translated_200_residues
MSTILSTDTKPMTDKRQAILETALRLFVDQGFHGTSTASIAKQAGVATGTLFHHFPTKEALMENLFLTIKQEFANALLLQ
VGEGQDLKHNAETLWQSAIDWSIENPVKQLFFQQYSMSPQIALHIREQAMNSILGFIAQLIKQGQLMGLIAHYPVDLMLE
NCHGQYLAATRFFIDNPALGKDKHYRDASFALFWKALQAD
>Mature_199_residues
STILSTDTKPMTDKRQAILETALRLFVDQGFHGTSTASIAKQAGVATGTLFHHFPTKEALMENLFLTIKQEFANALLLQV
GEGQDLKHNAETLWQSAIDWSIENPVKQLFFQQYSMSPQIALHIREQAMNSILGFIAQLIKQGQLMGLIAHYPVDLMLEN
CHGQYLAATRFFIDNPALGKDKHYRDASFALFWKALQAD

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22497; Mature: 22366

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTILSTDTKPMTDKRQAILETALRLFVDQGFHGTSTASIAKQAGVATGTLFHHFPTKEA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHH
LMENLFLTIKQEFANALLLQVGEGQDLKHNAETLWQSAIDWSIENPVKQLFFQQYSMSPQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
IALHIREQAMNSILGFIAQLIKQGQLMGLIAHYPVDLMLENCHGQYLAATRFFIDNPALG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHEECCCCCC
KDKHYRDASFALFWKALQAD
CCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
STILSTDTKPMTDKRQAILETALRLFVDQGFHGTSTASIAKQAGVATGTLFHHFPTKEA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHCCCHHH
LMENLFLTIKQEFANALLLQVGEGQDLKHNAETLWQSAIDWSIENPVKQLFFQQYSMSPQ
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCH
IALHIREQAMNSILGFIAQLIKQGQLMGLIAHYPVDLMLENCHGQYLAATRFFIDNPALG
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHCCCCCHHHHHHEECCCCCC
KDKHYRDASFALFWKALQAD
CCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA