| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921688
Identifier: 117921688
GI number: 117921688
Start: 3892145
End: 3892543
Strand: Reverse
Name: 117921688
Synonym: Shewana3_3250
Alternate gene names: NA
Gene position: 3892543-3892145 (Counterclockwise)
Preceding gene: 117921691
Following gene: 117921687
Centisome position: 78.29
GC content: 45.61
Gene sequence:
>399_bases ATGACTTTGTTAAAGCATGGTATTTCTGTTGGCATTGAGCGTTATGGCGATGATGATTTTTTTGTTGCCTTTAAAGCGGT TGGTACCTTAACTCATCAAGATTATGAGGTGATGGTGCCCGTGCTCGAGGCCGCGTTAGCAGGGGTAAAAGATCCCGATA TTTATGCCTTAGTCGATGTGACTGAGCTCGAAGGTTGGGAACTTCAAGCCGCTTGGGACGATCTAAAATTAGGGGTTAAG CATGTTCGTCACTTTGAGCGGATTGCCATAGTCGGTAAAACGACGTTACAGGAGGTGATGGCAAAGCTGGCAAACTGGTT CACTCCGGCCGAGGTTAAGTTTTTTGTCGATAAGCTGGATGCTATTACTTGGCTCAAAGATGAGCTTAACGATGACTAG
Upstream 100 bases:
>100_bases AGCATACGCAAGTGTTCTGGTGCTTTTATGAGCAAGATCACGGCCTGTTATGGGCTTAACTTCTACACTTAAAAGGTAGT TTGTTAGACAAGGAGTAGGT
Downstream 100 bases:
>100_bases CCATTAAGGAGAACAGATTATGCGTTCAGGTCAAATACTCTGGCCCACAGATTTTTCGGAAACTGCGGCCCATGCGCTAC GTTATGCTATTGAAATGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MTLLKHGISVGIERYGDDDFFVAFKAVGTLTHQDYEVMVPVLEAALAGVKDPDIYALVDVTELEGWELQAAWDDLKLGVK HVRHFERIAIVGKTTLQEVMAKLANWFTPAEVKFFVDKLDAITWLKDELNDD
Sequences:
>Translated_132_residues MTLLKHGISVGIERYGDDDFFVAFKAVGTLTHQDYEVMVPVLEAALAGVKDPDIYALVDVTELEGWELQAAWDDLKLGVK HVRHFERIAIVGKTTLQEVMAKLANWFTPAEVKFFVDKLDAITWLKDELNDD >Mature_131_residues TLLKHGISVGIERYGDDDFFVAFKAVGTLTHQDYEVMVPVLEAALAGVKDPDIYALVDVTELEGWELQAAWDDLKLGVKH VRHFERIAIVGKTTLQEVMAKLANWFTPAEVKFFVDKLDAITWLKDELNDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14921; Mature: 14790
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLKHGISVGIERYGDDDFFVAFKAVGTLTHQDYEVMVPVLEAALAGVKDPDIYALVDV CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE TELEGWELQAAWDDLKLGVKHVRHFERIAIVGKTTLQEVMAKLANWFTPAEVKFFVDKLD EECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AITWLKDELNDD HHHHHHHHCCCC >Mature Secondary Structure TLLKHGISVGIERYGDDDFFVAFKAVGTLTHQDYEVMVPVLEAALAGVKDPDIYALVDV CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE TELEGWELQAAWDDLKLGVKHVRHFERIAIVGKTTLQEVMAKLANWFTPAEVKFFVDKLD EECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AITWLKDELNDD HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA