Click here to switch to the map view.

The map label for this gene is 117921636

Identifier: 117921636

GI number: 117921636

Start: 3837033

End: 3838613

Strand: Direct

Name: 117921636

Synonym: Shewana3_3198

Alternate gene names: NA

Gene position: 3837033-3838613 (Clockwise)

Preceding gene: 117921635

Following gene: 117921637

Centisome position: 77.17

GC content: 50.54

Gene sequence:

>1581_bases
ATGCAATCCAAGATGGTTTTGAGGCATAGTAGCCCTCTATTTGGCATGACCCACGCTAGGCTTTACTCTTATCCCATGGA
TTTACGCAGTCGTTATTCCACTCTCTTTCACTCTAAGCGCTTTCACTCTAAGCGCTTTCACTCTAGACGCTTTCAGTCCA
AGCACTTTGAGCTCAAGCACTTTGAGCCTAGGCGCTCTAAATCCTTGCAAGCGATACATCGCCCCCTTTTTCTATTACTG
GCGTTATCCTTTAGCTTAGTTTTCCTGAGTGCCTGTCAGCCAGCAAATCAAAATACATCGAGCATAAAAACAGACACCTC
CGCCCCGCGTGAATTAAGCCAAGAGGTGTATGTGTGGCAGCGGCAATGGCGCGATGCTAATCAAAGCGCCTTGGTCGAAA
GCCAAAGCGCGTTTAATGGCGTGCGCATTCTTGCATTGCAAGCCCATCCCAAACCCAATGGCGCGGATATCTGGTTTGAA
GTGCAGGTCAACCATGAATGGTTACAGGCCGATCCTCGCCCTAAAGTGGCGGTAATAAGATTAGATGGCCAACTAACGCG
CCTAAATAATCGCGAAGTAATCCAAAAAATCCTCGCGCTCATTCAAGACTGGCAGGCAAAGGGTATCAAGCTTGCGGGAA
TTGAAATCGACTACGATAGCGCCAGCAGTAAACTCGCGGCCTATAACGCTTTTTTACTCGAGTTAAAAAGCCAATTACCT
CACACACTTAAACTCAGCATTACCTCATTGCCCGCTTGGTTGAGCAGCCCGGAGTTTCCGCCGCTATTTGATAATATCGA
TGAGCTGGTACTGCAAATTCACAGTGTCAGCGATCCACGTTTAGGGCTGTTCGATGCCACGCAGGGTTGGCAGTGGGTCG
AGCAGCTATCACGGTTAGCCAAGGTGCCTTATCTCATAGCTTTGCCGTCTTATGGCTCGGCGGTGTATAGCACAGCATCG
GGTTATCGAGTGGAGAGTGAAGTGCCGATGCGAATGCCATTGGCAGACACTGTATCTTCGCAGCATGTTGCGCGCCAAGA
GTTGATGGCCGATCCACAGGTGTTGCAGTCCTTCGTCAAACAACTGCACACCTTTGCCGACCCCAAGCTTAAGGGAATGA
TTTGGTTTCGATTACCCCTCGAAGGGGATAAACGGGTTTGGCCACTCTCGACCCTGATTGCGGTCGCCCAGCAGCAACCA
CTCGCCCCGCACATTGAGCTAGAAATCTTAAACCAAGCCAATACTGAGCCTGCCCAACATGAGGCACCGAAAACCAGCTT
ATTTCAATTAGTGTTAGTCAATAAGGGCAATCTTGCGGGCGAGTTGCCGGGCCAGTTGTCCCTAGCGGCGCAGGCGTGCA
GCGGGTATGATGCGCAAAACGGTTATCAAGCCAAATTAACCCAAGGAACATTAGTGTGGCTGTTACCGCAAGCCACCTCA
ACGGAGCGCGCAGCAGAGCCTGCCTCCTCGCAGTTTGCACCGAATTTAATCTCAGCGGTCGAGCTAAGCCCAAACGGGCG
CAGAGTTATCGGTTGGGCACGTTGTGAGTCATTACATTTACAGGGAATTTATGCGCCATAA

Upstream 100 bases:

>100_bases
GCCCAGCACTATTGCTGGGCGCGTTATTAAGGCGTTTAAGCCGAGTTAACCGCCATACCAATCCTACTCAAATTGATTTC
GCGTCTAATGCAAAAGCCTG

Downstream 100 bases:

>100_bases
GCCACATTCATTGCCAGCGAATCCTCTCCCTCGCTGGAAAACCAAATTCAAACAAACCAGCCTGATTGGGTTAAGTCTCT
TCTCCCCCGCACTGTTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MQSKMVLRHSSPLFGMTHARLYSYPMDLRSRYSTLFHSKRFHSKRFHSRRFQSKHFELKHFEPRRSKSLQAIHRPLFLLL
ALSFSLVFLSACQPANQNTSSIKTDTSAPRELSQEVYVWQRQWRDANQSALVESQSAFNGVRILALQAHPKPNGADIWFE
VQVNHEWLQADPRPKVAVIRLDGQLTRLNNREVIQKILALIQDWQAKGIKLAGIEIDYDSASSKLAAYNAFLLELKSQLP
HTLKLSITSLPAWLSSPEFPPLFDNIDELVLQIHSVSDPRLGLFDATQGWQWVEQLSRLAKVPYLIALPSYGSAVYSTAS
GYRVESEVPMRMPLADTVSSQHVARQELMADPQVLQSFVKQLHTFADPKLKGMIWFRLPLEGDKRVWPLSTLIAVAQQQP
LAPHIELEILNQANTEPAQHEAPKTSLFQLVLVNKGNLAGELPGQLSLAAQACSGYDAQNGYQAKLTQGTLVWLLPQATS
TERAAEPASSQFAPNLISAVELSPNGRRVIGWARCESLHLQGIYAP

Sequences:

>Translated_526_residues
MQSKMVLRHSSPLFGMTHARLYSYPMDLRSRYSTLFHSKRFHSKRFHSRRFQSKHFELKHFEPRRSKSLQAIHRPLFLLL
ALSFSLVFLSACQPANQNTSSIKTDTSAPRELSQEVYVWQRQWRDANQSALVESQSAFNGVRILALQAHPKPNGADIWFE
VQVNHEWLQADPRPKVAVIRLDGQLTRLNNREVIQKILALIQDWQAKGIKLAGIEIDYDSASSKLAAYNAFLLELKSQLP
HTLKLSITSLPAWLSSPEFPPLFDNIDELVLQIHSVSDPRLGLFDATQGWQWVEQLSRLAKVPYLIALPSYGSAVYSTAS
GYRVESEVPMRMPLADTVSSQHVARQELMADPQVLQSFVKQLHTFADPKLKGMIWFRLPLEGDKRVWPLSTLIAVAQQQP
LAPHIELEILNQANTEPAQHEAPKTSLFQLVLVNKGNLAGELPGQLSLAAQACSGYDAQNGYQAKLTQGTLVWLLPQATS
TERAAEPASSQFAPNLISAVELSPNGRRVIGWARCESLHLQGIYAP
>Mature_526_residues
MQSKMVLRHSSPLFGMTHARLYSYPMDLRSRYSTLFHSKRFHSKRFHSRRFQSKHFELKHFEPRRSKSLQAIHRPLFLLL
ALSFSLVFLSACQPANQNTSSIKTDTSAPRELSQEVYVWQRQWRDANQSALVESQSAFNGVRILALQAHPKPNGADIWFE
VQVNHEWLQADPRPKVAVIRLDGQLTRLNNREVIQKILALIQDWQAKGIKLAGIEIDYDSASSKLAAYNAFLLELKSQLP
HTLKLSITSLPAWLSSPEFPPLFDNIDELVLQIHSVSDPRLGLFDATQGWQWVEQLSRLAKVPYLIALPSYGSAVYSTAS
GYRVESEVPMRMPLADTVSSQHVARQELMADPQVLQSFVKQLHTFADPKLKGMIWFRLPLEGDKRVWPLSTLIAVAQQQP
LAPHIELEILNQANTEPAQHEAPKTSLFQLVLVNKGNLAGELPGQLSLAAQACSGYDAQNGYQAKLTQGTLVWLLPQATS
TERAAEPASSQFAPNLISAVELSPNGRRVIGWARCESLHLQGIYAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59183; Mature: 59183

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSKMVLRHSSPLFGMTHARLYSYPMDLRSRYSTLFHSKRFHSKRFHSRRFQSKHFELKH
CCCCEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FEPRRSKSLQAIHRPLFLLLALSFSLVFLSACQPANQNTSSIKTDTSAPRELSQEVYVWQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RQWRDANQSALVESQSAFNGVRILALQAHPKPNGADIWFEVQVNHEWLQADPRPKVAVIR
HHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEECCHHCCCCCCCCEEEEE
LDGQLTRLNNREVIQKILALIQDWQAKGIKLAGIEIDYDSASSKLAAYNAFLLELKSQLP
ECCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
HTLKLSITSLPAWLSSPEFPPLFDNIDELVLQIHSVSDPRLGLFDATQGWQWVEQLSRLA
CEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
KVPYLIALPSYGSAVYSTASGYRVESEVPMRMPLADTVSSQHVARQELMADPQVLQSFVK
HCCEEEEECCCCCHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
QLHTFADPKLKGMIWFRLPLEGDKRVWPLSTLIAVAQQQPLAPHIELEILNQANTEPAQH
HHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
EAPKTSLFQLVLVNKGNLAGELPGQLSLAAQACSGYDAQNGYQAKLTQGTLVWLLPQATS
CCCCHHEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCC
TERAAEPASSQFAPNLISAVELSPNGRRVIGWARCESLHLQGIYAP
CHHHCCCCCCCCCCCHHEEEEECCCCCEEEEEEEECEEEEEEECCC
>Mature Secondary Structure
MQSKMVLRHSSPLFGMTHARLYSYPMDLRSRYSTLFHSKRFHSKRFHSRRFQSKHFELKH
CCCCEEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
FEPRRSKSLQAIHRPLFLLLALSFSLVFLSACQPANQNTSSIKTDTSAPRELSQEVYVWQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RQWRDANQSALVESQSAFNGVRILALQAHPKPNGADIWFEVQVNHEWLQADPRPKVAVIR
HHHCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEEEEEECCHHCCCCCCCCEEEEE
LDGQLTRLNNREVIQKILALIQDWQAKGIKLAGIEIDYDSASSKLAAYNAFLLELKSQLP
ECCCEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCC
HTLKLSITSLPAWLSSPEFPPLFDNIDELVLQIHSVSDPRLGLFDATQGWQWVEQLSRLA
CEEEEEEECCCHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHH
KVPYLIALPSYGSAVYSTASGYRVESEVPMRMPLADTVSSQHVARQELMADPQVLQSFVK
HCCEEEEECCCCCHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH
QLHTFADPKLKGMIWFRLPLEGDKRVWPLSTLIAVAQQQPLAPHIELEILNQANTEPAQH
HHHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCC
EAPKTSLFQLVLVNKGNLAGELPGQLSLAAQACSGYDAQNGYQAKLTQGTLVWLLPQATS
CCCCHHEEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCEEEEEECCCCC
TERAAEPASSQFAPNLISAVELSPNGRRVIGWARCESLHLQGIYAP
CHHHCCCCCCCCCCCHHEEEEECCCCCEEEEEEEECEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA