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The map label for this gene is yibI [H]

Identifier: 117921632

GI number: 117921632

Start: 3832387

End: 3832803

Strand: Reverse

Name: yibI [H]

Synonym: Shewana3_3194

Alternate gene names: 117921632

Gene position: 3832803-3832387 (Counterclockwise)

Preceding gene: 117921633

Following gene: 117921631

Centisome position: 77.08

GC content: 47.24

Gene sequence:

>417_bases
ATGTTTTTGGATTATTTTGCCTTAGGCATTTTGTTTTTTGTCATAGTGGTGATCTTCTATGGCGTAATTGCCATTCACGA
TATCCCCTATGAAATTGCGAAAAAACGCAATCATCCCCAGCAGGATGCATTGCATATCGCGGGCTGGGTCAGTTTATTTA
CCTTGCATGCCCTTTGGCCGTTTCTGTGGATTTGGGCGACCTTATATCGAGAAGATAGAGGCTGGGGCTTTAATACCGTG
ATGAAGCGCGAGCAGGCATTGGAGGATGATGTTAAAGCGCTAAGGGAAACGGTATTGGCCTTGCAGGCAAAGCTTGAACA
ACTGGAATCGACAGCCAAGCCTGCGGTGGTGAAGCAATCCGAGGCAATACCCACAGAAGCCAGTGTGACCGAAACTAGCC
AAAAAGCCGAGGTGTAA

Upstream 100 bases:

>100_bases
ATTGTGCTGCACATTGATAGGCACGGTTGCAAAGGGCGGTTTCGGCAAGGGGATTGATTTCTAACCGAAATAAAGAGCGG
GAAGGGAGTGGGAGCTGAAC

Downstream 100 bases:

>100_bases
CATGGATTTACTACTGATATTAACCTACGCCTCGATCTGCATTGTGATTTTTAAAGTGTTTAAGATCCCAATGAATAAAT
GGACAGTGCCGACCGCCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MFLDYFALGILFFVIVVIFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHALWPFLWIWATLYREDRGWGFNTV
MKREQALEDDVKALRETVLALQAKLEQLESTAKPAVVKQSEAIPTEASVTETSQKAEV

Sequences:

>Translated_138_residues
MFLDYFALGILFFVIVVIFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHALWPFLWIWATLYREDRGWGFNTV
MKREQALEDDVKALRETVLALQAKLEQLESTAKPAVVKQSEAIPTEASVTETSQKAEV
>Mature_138_residues
MFLDYFALGILFFVIVVIFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHALWPFLWIWATLYREDRGWGFNTV
MKREQALEDDVKALRETVLALQAKLEQLESTAKPAVVKQSEAIPTEASVTETSQKAEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yiaW [H]

Homologues:

Organism=Escherichia coli, GI1790025, Length=112, Percent_Identity=60.7142857142857, Blast_Score=148, Evalue=1e-37,
Organism=Escherichia coli, GI1790013, Length=112, Percent_Identity=58.9285714285714, Blast_Score=146, Evalue=4e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011223 [H]

Pfam domain/function: PF11742 DUF3302 [H]

EC number: NA

Molecular weight: Translated: 15803; Mature: 15803

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLDYFALGILFFVIVVIFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHALWP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FLWIWATLYREDRGWGFNTVMKREQALEDDVKALRETVLALQAKLEQLESTAKPAVVKQS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
EAIPTEASVTETSQKAEV
CCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MFLDYFALGILFFVIVVIFYGVIAIHDIPYEIAKKRNHPQQDALHIAGWVSLFTLHALWP
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FLWIWATLYREDRGWGFNTVMKREQALEDDVKALRETVLALQAKLEQLESTAKPAVVKQS
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
EAIPTEASVTETSQKAEV
CCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8387990; 8041620; 9278503 [H]