| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is cysU [H]
Identifier: 117921628
GI number: 117921628
Start: 3828266
End: 3829111
Strand: Direct
Name: cysU [H]
Synonym: Shewana3_3190
Alternate gene names: 117921628
Gene position: 3828266-3829111 (Clockwise)
Preceding gene: 117921627
Following gene: 117921629
Centisome position: 76.99
GC content: 53.55
Gene sequence:
>846_bases GTGATATTTAATAATGGGCGCTTACGCCACAAGCGGGTTTTGCCGGGGTTTAGTATCAGCCTAGGTGTGTCTCTGCTGTT TGTCAGCTTGATCCTCCTGCTCCCCACCACAGGCCTGATTATGCAAACCAGCCAGATGAGCTGGGCCGAGTATTGGGGCG TGATTGCCGATCCCCGCGTGCTGGCAAGTTATAAAGTCACTATTTTATCTGCACTGGCCGCCTCCCTGTTTAACTGTCTT TTTGGCCTGTTACTCGCCTGGGTGTTGGTTCGTTATGAGTTTCCGGGTAAGCGCATCCTCGATGCCTTAGTCGATTTACC CTTTGCCTTACCCACAGCCGTCGCGGGTATCACCTTAGCGACCCTGTACGCCGAGAATGGCCAGATTGGTAGCCTGTTGG CCGAAATCGGGGTCAAAGTGGCTTACACACCATTGGGGATCGTGGTTGCGATGATCTTCACCAGCATTCCCTTCGTGGTG CGAACCGTCCAGCCCGTACTGGAAGAGTTATCCCACGATGAAGAAGAAGCTGGCATGACCTTAGGCGCAACCGATGGCGC CGTGTTTTGGCGGGTGATTTTACCTTCCCTCTGGCCTGCCTTAGTGGTCGGTACGGCGCTGTCTTTTACCCGCAGCCTAG GTGAGTTTGGCGCGGTGATTTTTATCGCAGGCAATATGCCCTACATCAGTGAAATCACCTCCCTGATGATTTTCGTTCGT CTACAGGAATTTGATTTTGCCGGCGCCAGCGCCATTGCCTCCGTTGTACTGCTAACCTCGCTGTTGCTGCTACTGCTGAT TAACCTGTGGCAGGCGCGTTATTTACGCCGCATTCACGGCCGATAA
Upstream 100 bases:
>100_bases GGTCGCTATCACAAGTTGTCTTTATCGCGATTGAGCAATAATGTGCTAATGGCATAATAATATTGGATTAACTCCATTAA CCTTATCGGGTGGTTATTCA
Downstream 100 bases:
>100_bases GGAGCCACCATGAACTCATTTAAACCGTTAAGAGTCGGTGAAGCGCCCCTTATCAAATGGAGCCTAATCACCCTAGCCGT GTTTTTGGCCATGGTATTGT
Product: sulfate ABC transporter inner membrane subunit CysT
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MIFNNGRLRHKRVLPGFSISLGVSLLFVSLILLLPTTGLIMQTSQMSWAEYWGVIADPRVLASYKVTILSALAASLFNCL FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSLLAEIGVKVAYTPLGIVVAMIFTSIPFVV RTVQPVLEELSHDEEEAGMTLGATDGAVFWRVILPSLWPALVVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR LQEFDFAGASAIASVVLLTSLLLLLLINLWQARYLRRIHGR
Sequences:
>Translated_281_residues MIFNNGRLRHKRVLPGFSISLGVSLLFVSLILLLPTTGLIMQTSQMSWAEYWGVIADPRVLASYKVTILSALAASLFNCL FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSLLAEIGVKVAYTPLGIVVAMIFTSIPFVV RTVQPVLEELSHDEEEAGMTLGATDGAVFWRVILPSLWPALVVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR LQEFDFAGASAIASVVLLTSLLLLLLINLWQARYLRRIHGR >Mature_281_residues MIFNNGRLRHKRVLPGFSISLGVSLLFVSLILLLPTTGLIMQTSQMSWAEYWGVIADPRVLASYKVTILSALAASLFNCL FGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLATLYAENGQIGSLLAEIGVKVAYTPLGIVVAMIFTSIPFVV RTVQPVLEELSHDEEEAGMTLGATDGAVFWRVILPSLWPALVVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR LQEFDFAGASAIASVVLLTSLLLLLLINLWQARYLRRIHGR
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0555
COG function: function code O; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=272, Percent_Identity=67.2794117647059, Blast_Score=324, Evalue=3e-90, Organism=Escherichia coli, GI87082099, Length=255, Percent_Identity=34.1176470588235, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1786980, Length=232, Percent_Identity=36.2068965517241, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011865 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30670; Mature: 30670
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFNNGRLRHKRVLPGFSISLGVSLLFVSLILLLPTTGLIMQTSQMSWAEYWGVIADPRV CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCHH LASYKVTILSALAASLFNCLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH TLYAENGQIGSLLAEIGVKVAYTPLGIVVAMIFTSIPFVVRTVQPVLEELSHDEEEAGMT HHHHCCCCHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCE LGATDGAVFWRVILPSLWPALVVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHH LQEFDFAGASAIASVVLLTSLLLLLLINLWQARYLRRIHGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFNNGRLRHKRVLPGFSISLGVSLLFVSLILLLPTTGLIMQTSQMSWAEYWGVIADPRV CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCCHH LASYKVTILSALAASLFNCLFGLLLAWVLVRYEFPGKRILDALVDLPFALPTAVAGITLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHH TLYAENGQIGSLLAEIGVKVAYTPLGIVVAMIFTSIPFVVRTVQPVLEELSHDEEEAGMT HHHHCCCCHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCE LGATDGAVFWRVILPSLWPALVVGTALSFTRSLGEFGAVIFIAGNMPYISEITSLMIFVR EECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHH LQEFDFAGASAIASVVLLTSLLLLLLINLWQARYLRRIHGR HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2188958; 9205837; 9278503; 2188959 [H]