| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921583
Identifier: 117921583
GI number: 117921583
Start: 3771375
End: 3773741
Strand: Direct
Name: 117921583
Synonym: Shewana3_3145
Alternate gene names: NA
Gene position: 3771375-3773741 (Clockwise)
Preceding gene: 117921580
Following gene: 117921584
Centisome position: 75.85
GC content: 45.04
Gene sequence:
>2367_bases ATGACGACTACACATGAGATAAATGCTCTTAAAAAATATGTAAGAGCCACTAACTTCCTCGCCACCTCTCAGATTTACCT AAAGCAAAACGTATTACATAAGCGCCCACTTGCGCATTCGGACATTAAACCTCGCCTGTTAGGGCACTGGGGGACTTGTC CGGGGATTAACTTCGTTTATGCCAACGTCAACCGACTCATTGTAAAACATAATCGTCCTTTTATTTACTTAGTCGGCCCA GGCCATGGTTTCCCCGCAGTACAAGCTAACCTATTCATCGAAGGCTCACTCAGCCACTTTTATCCAGAAACCATTCCTTA TAATGAAACCGGTATCGAAGATATCTGTAAGAAGTTTTCGGCAGCCTATGGTTACCCTTCTCACGCAAACCCAGAAGCAC CCGGTCAAATCCTTGAAGGGGGCGAATTAGGTTACTCGTTAGCTGTAGGTTGGGGCGCGGTATTAGACAATCCTGATCTT ATCGCAACCGTATTAGTGGGCGACGGTGAATCAGAAACAGGTCCTCTTGCAGCCTCCTGGTATGCGAACCGTTTAGTCTC CCCTGCCACCAACGGCGCAGTGTTACCAATCGTGCATATCAACGGCTATAAGATTTCAGGCCCAACCCGTATGGGACGCA TGAGCCATGAAGAGCTCGATCTTGAATTCCGTGGTCTTGGTTATCACCCCATTATTGTCGACAGCGAAGCGGAAGAAGAT ATCTACGTCCAAATGACAGCCGCTATGGATACTGCTTATAGCATGATTAACGATATCCAAACCCGCGCACGTAAGGGTGA AGATATTGTCAAACCTCGCTGGCCAGTGATCTTAATGCGCACCGCCAAAGGCTGGACAGGTGTTAGCGAATATAATGGTA CAAAATTAGAAGGTAACTGCGAATCGCACCAAGTTATCGTCAACAAATGTGCGACCGATAAAGGCCACCTCAGCGCACTG GATAGCTGGTTGGCTAGCTATCAGTTCCAAGAGCTTTACCAAATCAATGGCCAGGGTGAACTGATTTTTGATGCAGATAT TAGCTCCTTGATCCCACCTAAGCATTTAGCTTGTGGTCGCCAACATCTCACTTATGGTGGTGAAGTTGTTAGATCGTTAT CCAATCCTGATCTCGAAAAACTCAGCTACGGTCCAGAAGTGCCACGTGGACACCGTGGCTACTCTATGTTGAAAATGGGT CAATGGATGCGTGATGCATTCAAACTGAACCGTGACCAACGCAACTTACGTATCTTTAGCCCAGACGAAACCTATTCAAA CCAACTGCAAGCAGTATTTGAAGAAACCGACCGCGCATGGCAATGGCCAATTGAAAGCTGGGACGAGGATATGACTCGTG ATGGCCGCGTGCTCGAGTTACTCTCTGAGAACTTGCTATTTGGTATGTTGCATGGCTACACAGTAACGGGTCGCCACGGC ATGTTCCCAACCTATGAGTCTTTCTCACAGGTTGTATCTTCAATGGCCGACCAATACTGTAAATATGTTTACGCCAGCCA AGGGGTGCATTTCCGCAAACCTCTACCGGCGTGCAACGTAGTACTTTCTTCATTATTAGAGCGTCAGGATCACAACGGTT ACTCGCATCAAAACCCATCGTTCCTCGGTGCGATGTTAGAAAAACATCCAAAGATTATCTCTGCTTATTTACCTGCTGAT GCAAACAGCACCTTAGTTTATACCGAACGCGCTTTTGCGGATCGTGACAAACTAAACATCCTAGTGGCTGGTAAGAAAGA GCTACCACAATGGCTGAGCTTAGAAGAAGCACGTAAACAAGCAAAAGACGGTGTGATGGTGTGGGATTTTGCTTCAGATG AAAATCCAGATATCGTGCTTGCAGGTTGTGGTGATTATGTCACTCAAGAATGTATGGCCTCTTTAGTGATTATTCGTGAA CTGTTACCAAGGGTCAGAATTCGTTTTGTCAGCGTGACCGAATTAAGCAGTGATGGCTTAGGTAGCCGTAAATTTAAAGA AAAACCATGGATGATGGATGAAATATTTACCCAAGATAAAGGGGTAGTATTTAACTATCACGGTTATCCAAATACGATCA AAAAGTTAATTTTTGACTACAAAGGAAGTCGCCGTTTCAGAATTAAAGGTTATGAGGAAGAAGGTTCAACAACAACACCA TTTGATATGGGTGTTCGCAATGGCACTTCTCGCTATCACCTTGTTATTGATATGGCTTACAAACTATTCCAACAAGGCGT CATTGATGAAACTAAGCACGTTTCAATCACGACCGATATGCTGCAACGACTGGTTGATCATCGCAACTATATTAAGGCAA ACGGTGTTGACCCTATTGAAATTGAAAATTGGGTTTGGACACGTTAA
Upstream 100 bases:
>100_bases TTTAAAATTTGGATGCAGGGCACATTTTTGTAAGAAAATTACAAATATAGTAATCCCAACACAACACAGTTCAATTCCGT CTGCTCTAGTGAGGCTTAAT
Downstream 100 bases:
>100_bases CCTTAAATTTAATTAACAAATTAAATACAATTAAAAGGCATCCTTCGGGATGCCTTTTTAACATCAATCAAAAGTAACAA TATTCTATTCGATAAAAAAA
Product: putative phosphoketolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 788; Mature: 787
Protein sequence:
>788_residues MTTTHEINALKKYVRATNFLATSQIYLKQNVLHKRPLAHSDIKPRLLGHWGTCPGINFVYANVNRLIVKHNRPFIYLVGP GHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFSAAYGYPSHANPEAPGQILEGGELGYSLAVGWGAVLDNPDL IATVLVGDGESETGPLAASWYANRLVSPATNGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDSEAEED IYVQMTAAMDTAYSMINDIQTRARKGEDIVKPRWPVILMRTAKGWTGVSEYNGTKLEGNCESHQVIVNKCATDKGHLSAL DSWLASYQFQELYQINGQGELIFDADISSLIPPKHLACGRQHLTYGGEVVRSLSNPDLEKLSYGPEVPRGHRGYSMLKMG QWMRDAFKLNRDQRNLRIFSPDETYSNQLQAVFEETDRAWQWPIESWDEDMTRDGRVLELLSENLLFGMLHGYTVTGRHG MFPTYESFSQVVSSMADQYCKYVYASQGVHFRKPLPACNVVLSSLLERQDHNGYSHQNPSFLGAMLEKHPKIISAYLPAD ANSTLVYTERAFADRDKLNILVAGKKELPQWLSLEEARKQAKDGVMVWDFASDENPDIVLAGCGDYVTQECMASLVIIRE LLPRVRIRFVSVTELSSDGLGSRKFKEKPWMMDEIFTQDKGVVFNYHGYPNTIKKLIFDYKGSRRFRIKGYEEEGSTTTP FDMGVRNGTSRYHLVIDMAYKLFQQGVIDETKHVSITTDMLQRLVDHRNYIKANGVDPIEIENWVWTR
Sequences:
>Translated_788_residues MTTTHEINALKKYVRATNFLATSQIYLKQNVLHKRPLAHSDIKPRLLGHWGTCPGINFVYANVNRLIVKHNRPFIYLVGP GHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFSAAYGYPSHANPEAPGQILEGGELGYSLAVGWGAVLDNPDL IATVLVGDGESETGPLAASWYANRLVSPATNGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDSEAEED IYVQMTAAMDTAYSMINDIQTRARKGEDIVKPRWPVILMRTAKGWTGVSEYNGTKLEGNCESHQVIVNKCATDKGHLSAL DSWLASYQFQELYQINGQGELIFDADISSLIPPKHLACGRQHLTYGGEVVRSLSNPDLEKLSYGPEVPRGHRGYSMLKMG QWMRDAFKLNRDQRNLRIFSPDETYSNQLQAVFEETDRAWQWPIESWDEDMTRDGRVLELLSENLLFGMLHGYTVTGRHG MFPTYESFSQVVSSMADQYCKYVYASQGVHFRKPLPACNVVLSSLLERQDHNGYSHQNPSFLGAMLEKHPKIISAYLPAD ANSTLVYTERAFADRDKLNILVAGKKELPQWLSLEEARKQAKDGVMVWDFASDENPDIVLAGCGDYVTQECMASLVIIRE LLPRVRIRFVSVTELSSDGLGSRKFKEKPWMMDEIFTQDKGVVFNYHGYPNTIKKLIFDYKGSRRFRIKGYEEEGSTTTP FDMGVRNGTSRYHLVIDMAYKLFQQGVIDETKHVSITTDMLQRLVDHRNYIKANGVDPIEIENWVWTR >Mature_787_residues TTTHEINALKKYVRATNFLATSQIYLKQNVLHKRPLAHSDIKPRLLGHWGTCPGINFVYANVNRLIVKHNRPFIYLVGPG HGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFSAAYGYPSHANPEAPGQILEGGELGYSLAVGWGAVLDNPDLI ATVLVGDGESETGPLAASWYANRLVSPATNGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDSEAEEDI YVQMTAAMDTAYSMINDIQTRARKGEDIVKPRWPVILMRTAKGWTGVSEYNGTKLEGNCESHQVIVNKCATDKGHLSALD SWLASYQFQELYQINGQGELIFDADISSLIPPKHLACGRQHLTYGGEVVRSLSNPDLEKLSYGPEVPRGHRGYSMLKMGQ WMRDAFKLNRDQRNLRIFSPDETYSNQLQAVFEETDRAWQWPIESWDEDMTRDGRVLELLSENLLFGMLHGYTVTGRHGM FPTYESFSQVVSSMADQYCKYVYASQGVHFRKPLPACNVVLSSLLERQDHNGYSHQNPSFLGAMLEKHPKIISAYLPADA NSTLVYTERAFADRDKLNILVAGKKELPQWLSLEEARKQAKDGVMVWDFASDENPDIVLAGCGDYVTQECMASLVIIREL LPRVRIRFVSVTELSSDGLGSRKFKEKPWMMDEIFTQDKGVVFNYHGYPNTIKKLIFDYKGSRRFRIKGYEEEGSTTTPF DMGVRNGTSRYHLVIDMAYKLFQQGVIDETKHVSITTDMLQRLVDHRNYIKANGVDPIEIENWVWTR
Specific function: Unknown
COG id: COG3957
COG function: function code G; Phosphoketolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the XFP family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR005593 - InterPro: IPR018969 - InterPro: IPR019790 - InterPro: IPR018970 - InterPro: IPR019789 [H]
Pfam domain/function: PF03894 XFP; PF09363 XFP_C; PF09364 XFP_N [H]
EC number: NA
Molecular weight: Translated: 89068; Mature: 88937
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS60002 PHOSPHOKETOLASE_1 ; PS60003 PHOSPHOKETOLASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTHEINALKKYVRATNFLATSQIYLKQNVLHKRPLAHSDIKPRLLGHWGTCPGINFVY CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEE ANVNRLIVKHNRPFIYLVGPGHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFS ECCEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECHHHHCCCCCCCCCCCHHHHHHHHH AAYGYPSHANPEAPGQILEGGELGYSLAVGWGAVLDNPDLIATVLVGDGESETGPLAASW HHCCCCCCCCCCCCCHHCCCCCCCEEEEEECHHHCCCCCEEEEEEEECCCCCCCCEEHHH YANRLVSPATNGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDSEAEED HHHHCCCCCCCCCEEEEEEECCEEECCCCHHCCCCCHHCCEEEECCCCCEEEECCCCCCC IYVQMTAAMDTAYSMINDIQTRARKGEDIVKPRWPVILMRTAKGWTGVSEYNGTKLEGNC EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCC ESHQVIVNKCATDKGHLSALDSWLASYQFQELYQINGQGELIFDADISSLIPPKHLACGR CCCHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHCCCCHHHHCCC QHLTYGGEVVRSLSNPDLEKLSYGPEVPRGHRGYSMLKMGQWMRDAFKLNRDQRNLRIFS HHCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC PDETYSNQLQAVFEETDRAWQWPIESWDEDMTRDGRVLELLSENLLFGMLHGYTVTGRHG CCHHHHHHHHHHHHHHCCCEECCHHHHCHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCC MFPTYESFSQVVSSMADQYCKYVYASQGVHFRKPLPACNVVLSSLLERQDHNGYSHQNPS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCHH FLGAMLEKHPKIISAYLPADANSTLVYTERAFADRDKLNILVAGKKELPQWLSLEEARKQ HHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHCCCCCEEEEEECCHHCHHHCCHHHHHHH AKDGVMVWDFASDENPDIVLAGCGDYVTQECMASLVIIRELLPRVRIRFVSVTELSSDGL HHCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC GSRKFKEKPWMMDEIFTQDKGVVFNYHGYPNTIKKLIFDYKGSRRFRIKGYEEEGSTTTP CCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC FDMGVRNGTSRYHLVIDMAYKLFQQGVIDETKHVSITTDMLQRLVDHRNYIKANGVDPIE HHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCEEECCCCCCEE IENWVWTR ECCCCCCC >Mature Secondary Structure TTTHEINALKKYVRATNFLATSQIYLKQNVLHKRPLAHSDIKPRLLGHWGTCPGINFVY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCCEEEE ANVNRLIVKHNRPFIYLVGPGHGFPAVQANLFIEGSLSHFYPETIPYNETGIEDICKKFS ECCEEEEEECCCCEEEEEECCCCCCCEEEEEEEEECHHHHCCCCCCCCCCCHHHHHHHHH AAYGYPSHANPEAPGQILEGGELGYSLAVGWGAVLDNPDLIATVLVGDGESETGPLAASW HHCCCCCCCCCCCCCHHCCCCCCCEEEEEECHHHCCCCCEEEEEEEECCCCCCCCEEHHH YANRLVSPATNGAVLPIVHINGYKISGPTRMGRMSHEELDLEFRGLGYHPIIVDSEAEED HHHHCCCCCCCCCEEEEEEECCEEECCCCHHCCCCCHHCCEEEECCCCCEEEECCCCCCC IYVQMTAAMDTAYSMINDIQTRARKGEDIVKPRWPVILMRTAKGWTGVSEYNGTKLEGNC EEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCC ESHQVIVNKCATDKGHLSALDSWLASYQFQELYQINGQGELIFDADISSLIPPKHLACGR CCCHHEEEHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCEEECCCHHHCCCCHHHHCCC QHLTYGGEVVRSLSNPDLEKLSYGPEVPRGHRGYSMLKMGQWMRDAFKLNRDQRNLRIFS HHCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEC PDETYSNQLQAVFEETDRAWQWPIESWDEDMTRDGRVLELLSENLLFGMLHGYTVTGRHG CCHHHHHHHHHHHHHHCCCEECCHHHHCHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCC MFPTYESFSQVVSSMADQYCKYVYASQGVHFRKPLPACNVVLSSLLERQDHNGYSHQNPS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHCCCCCCCCCHH FLGAMLEKHPKIISAYLPADANSTLVYTERAFADRDKLNILVAGKKELPQWLSLEEARKQ HHHHHHHHCCCEEEEECCCCCCCEEEEEEHHHCCCCCEEEEEECCHHCHHHCCHHHHHHH AKDGVMVWDFASDENPDIVLAGCGDYVTQECMASLVIIRELLPRVRIRFVSVTELSSDGL HHCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCC GSRKFKEKPWMMDEIFTQDKGVVFNYHGYPNTIKKLIFDYKGSRRFRIKGYEEEGSTTTP CCCCCCCCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCCC FDMGVRNGTSRYHLVIDMAYKLFQQGVIDETKHVSITTDMLQRLVDHRNYIKANGVDPIE HHCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCEEECCCCCCEE IENWVWTR ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]