Click here to switch to the map view.

The map label for this gene is 117921557

Identifier: 117921557

GI number: 117921557

Start: 3742663

End: 3743322

Strand: Reverse

Name: 117921557

Synonym: Shewana3_3119

Alternate gene names: NA

Gene position: 3743322-3742663 (Counterclockwise)

Preceding gene: 117921558

Following gene: 117921555

Centisome position: 75.28

GC content: 43.03

Gene sequence:

>660_bases
ATGGCTATGATGTTAGTGCCAATATTTGATAACGCAATCTGTGTCTATGATTTTGAGCTGTATAATCGTTTTGAGGGTAA
AGACGATACTTATCAAACTATTGACGCCTTGTTTGCGTTACCAGAAGTGCTAAATGAGGCAAATGTACCCGATGCTAATG
GGGGACGAGCCTTGTCTACGGTTCACATGCATCAAACCCATCCAATTCCTCAGCTGTTAAATTTTAAGTCCAATCCTTTA
GGCCGTTGGATATTGATGTGTATTTTTGATGCGGCGATACAGCTTGGATTTGATAAAACGAGAAATATTCGAAAGTTAAA
GTACCACCGTACTTGGGCTAATCGTATGGAGTATGGTTGTGATGCTGTGGCTCACAGGCATGCGAATGATGCTTGGTCTA
TACCGCATTTAGTTGCCATTTATTACACAGATGTGCCTGAAAATAGCGCTGATTTAGTGTTTATTCAGGATGATAATCGG
CAGGTTATGCGTGGTAAGTCATGCAGTGAGTATCCATTGGCGCAGCAATATAGAGTCAGTTCACAAGCGGGGAGGTTGGT
TTGCCATGATGCCCGTTTTTTACATGGCACAACGGTCCATAAAAACACCTTGCCTCGGACTTGTTTAGTGATAGAGGTCG
GCTTCCCTCCGCTGGATTGA

Upstream 100 bases:

>100_bases
TTAAAGCGGCCTCAATGCTGTTAAAACATCGAGATTGGCTTGAAGGCTTAAAGCAGGCCTTTGAGCAGGCTCGTTCTACA
AAGGTTTAATTTCAATCTGG

Downstream 100 bases:

>100_bases
GTAACATTTTCAGCTTAAATTTCCGTATAGCAGAAGGTCAAATCATTACAAAGCCAGTCAAGATAATCCAACTTGAGAAA
AACAGCTTTAAGGTTTTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MAMMLVPIFDNAICVYDFELYNRFEGKDDTYQTIDALFALPEVLNEANVPDANGGRALSTVHMHQTHPIPQLLNFKSNPL
GRWILMCIFDAAIQLGFDKTRNIRKLKYHRTWANRMEYGCDAVAHRHANDAWSIPHLVAIYYTDVPENSADLVFIQDDNR
QVMRGKSCSEYPLAQQYRVSSQAGRLVCHDARFLHGTTVHKNTLPRTCLVIEVGFPPLD

Sequences:

>Translated_219_residues
MAMMLVPIFDNAICVYDFELYNRFEGKDDTYQTIDALFALPEVLNEANVPDANGGRALSTVHMHQTHPIPQLLNFKSNPL
GRWILMCIFDAAIQLGFDKTRNIRKLKYHRTWANRMEYGCDAVAHRHANDAWSIPHLVAIYYTDVPENSADLVFIQDDNR
QVMRGKSCSEYPLAQQYRVSSQAGRLVCHDARFLHGTTVHKNTLPRTCLVIEVGFPPLD
>Mature_218_residues
AMMLVPIFDNAICVYDFELYNRFEGKDDTYQTIDALFALPEVLNEANVPDANGGRALSTVHMHQTHPIPQLLNFKSNPLG
RWILMCIFDAAIQLGFDKTRNIRKLKYHRTWANRMEYGCDAVAHRHANDAWSIPHLVAIYYTDVPENSADLVFIQDDNRQ
VMRGKSCSEYPLAQQYRVSSQAGRLVCHDARFLHGTTVHKNTLPRTCLVIEVGFPPLD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25024; Mature: 24893

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMMLVPIFDNAICVYDFELYNRFEGKDDTYQTIDALFALPEVLNEANVPDANGGRALST
CCEEEEEECCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
VHMHQTHPIPQLLNFKSNPLGRWILMCIFDAAIQLGFDKTRNIRKLKYHRTWANRMEYGC
EEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCH
DAVAHRHANDAWSIPHLVAIYYTDVPENSADLVFIQDDNRQVMRGKSCSEYPLAQQYRVS
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCHHHHHHH
SQAGRLVCHDARFLHGTTVHKNTLPRTCLVIEVGFPPLD
CCCCEEEEECCEEECCCEEECCCCCCEEEEEEECCCCCC
>Mature Secondary Structure 
AMMLVPIFDNAICVYDFELYNRFEGKDDTYQTIDALFALPEVLNEANVPDANGGRALST
CEEEEEECCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE
VHMHQTHPIPQLLNFKSNPLGRWILMCIFDAAIQLGFDKTRNIRKLKYHRTWANRMEYGC
EEECCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCH
DAVAHRHANDAWSIPHLVAIYYTDVPENSADLVFIQDDNRQVMRGKSCSEYPLAQQYRVS
HHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCEECCCCCCCCCCHHHHHHH
SQAGRLVCHDARFLHGTTVHKNTLPRTCLVIEVGFPPLD
CCCCEEEEECCEEECCCEEECCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA