| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921500
Identifier: 117921500
GI number: 117921500
Start: 3670640
End: 3673048
Strand: Direct
Name: 117921500
Synonym: Shewana3_3062
Alternate gene names: NA
Gene position: 3670640-3673048 (Clockwise)
Preceding gene: 117921498
Following gene: 117921502
Centisome position: 73.82
GC content: 49.98
Gene sequence:
>2409_bases ATGCTTCGCTTAACCTTGATCGGCATCTGGACTATGCTATGCCTGATTTTTATCCCCAACGCCTTAGCGCAGGACTACCA GAAACCTTCCCCCGCACTGCAACAAACCATTGCACATAACGCGGCTCTCACAACTAGACTCTCAAACGATCATCAGTGGC TGGCATTACTTAGCCCAATTGCAGCGCCGAGCATTGCCACGCTGGCCCAGCCAGAGCAGAAGTTGGCAGGATTACGTATC GCCGCCGAGCAATATTTACCGAGCCGTATCACCCAGCGCTACCACCAACTCAAGCTGATTAGTATTCAGGACAATCGGCA GCGGCTGATAAGCTTGCCCGGTGGCCATGATATCACCGAGCTGCAATTTTCCCCCGACAGTCGCTACCTCTCCTATGTCA GCCTAACGCCAGAGGGTGGTTACTTATATGTTTACGACATCGCTCAAAACCGCCACAAGCGCCTGTCAGACAACCGATTA AATGGCACGATTAGCCTTGATTATCAATGGGCTAACAATAACAGCCTGCTTGCTCGCTTTGTCATAGCCTCCAATACCAA CGCAAGCATGGCTCCTACCCTTTACGCACCGAAAACCAAAGAAACCTCGGGCAAACAAAGCCCGCAGCGCACCTATCAAG ACTTATTGAAAACCAGCGCTGACAAACAACGCTTTAGCCAACTGACGACCAGTCAACTGGCCCTTGTGGATATGGATGGC AAGCTGACAAATATCGCTGCGCCGGGCATCTTTGAGGATTTTTCGCTGTCGCCAGATGGTCAATATATCTTAACCCATCA GCTCACTACACCCTTCTCAACCCAAGTAAAGTATTATGATTTTCCAATCTTAACAGAGATTTATAATCTTGATGGTCAAC GCATTACGCAACTGCACCAAAGCCAGAGTGGAGAATCTAAGCCCCAAGGAAGAGACTCAGTTTTACCCGGCCCTCGCATG TTCCATTGGGTTCAAGGGCAAGGCGCAACCTTAGCCTTTACTGAGGCTTTAGATCAGGGCGATAGCCAGCAAGAGGCGCC GCTACGGGATAGCCTATGGCAACTCGATGCCCCCTTTACCCAAAAGGCCAAACTCATCGCCAAAACCCCTTGGCGGATCA TCGATATCGACTGGGCAGAAAATAACATCGCCTTAGTGAGCCAGCGCAATAGCAAAGCACAGTTACTGCGACTGAGTCGC CTAGACCCTCATCTTGGGGAAAGTTCGTTGTATACCTTGAACGAGCGAAATCTACGCGATAAATATCAAGAGCTTGGAAA ATTCCCCAGAGAATATACCCAAGGCAAAGGGCTAGTGATCCGCGTGCAGCAAGCACAAACCGCAGGGGTTATTCACAACG GCCAAGGGGCATCGCCTCAAGGCGATAAGCCATTTTTAAAACGCACCTCACTCGCCACAGGAGAATCCTCACTGTTATGG CAATCTGCAACCAACCAATTAGAATCGGTGCGCTATGTGCTCAATCTTGAGCCCTTACAACTGATTATCAACCGTGAAAG TCCGACTGAAGCCCCAAGCCTCGTGTTAATCGATGGCGCCAAAGAACGTGTGCTCTACCAACAGGCCGATGAATTGAGTG CGTATCGGGGGATGCGGAAGCAGCTGATCACCTACAAAAGAGCCGATGGCGTGCCCCTGTCAGGCACTCTCTACTTACCC GCTAATTACACCAAGGAGCAAGGTACCTTACCCGTATTGATGTGGGCTTATCCACGGGAATTTAACGATCCCGATGTCGC GGGCCAAATCAGCTTTAGCGCCAACCAATATCCCAGCATCAGCCCAAGGGGCCCGATCCCATTAGTTGCTGAAGGCTTTG CGGTGTTTGATAAAGTCTCTATGCCTATCATCGCTCAAGGGGATAAAGAACCCAATGACAGCTTTCGCGAGCAACTCGTT GCCAACGCACAGGCGGCTGTCGATACCTTGGTCGATTTAGGCATTGCCGATCGCAAACAAATCGCCGTGGGTGGACACTC CTACGGGGCCTTTATGGTGGCGAACTTGCTCGCCCATACGGATTTGTTCTATGCAGGCATTGCCCGTAGCGGTGCTTATA ATCGCAGTCTAACGCCTTTTGGCTTTCAAAATGAGGAGCGTTACTACTGGCAAGCCAATGATATTTACCAGCAAATGTCA CCATTTAATTATGCCGATAACATCAAATCCCCCTTGCTATTAGTTCACGGAGAGATGGATCAAAATTCAGGCACTTTCCC ACTGCAATCTGAGCGACTATTTGATGCCATTCAAGGCCTTGGCGGTAAAGCAAGATTAGTTATCCTGCCCTTTGAAGGAC ACGGTTATGCGGCTAAGGAATCCCTCGAACACTTGCTCTGGGAACAAAGCCAGTTTTTAAAAGCAAATCTGCCGTCCACG AACCTGTAA
Upstream 100 bases:
>100_bases ACTTACAACTGATTGACCAATAACAACATAAGAGTCAAAGCCTTACTCCTGCGGTTAACTCATCTCAGCAGGGGTAATTT ACTTTACTAGGAACCCAAGT
Downstream 100 bases:
>100_bases AAATCAGCGCTTTGCATTCCACAAGAACACATCCATCAGATGATTGGCGGCACAATAAGCAGCCAATCGCTTAACAAGTT ACTGCTATCACTTATCCCTA
Product: glutamyl peptidase
Products: NA
Alternate protein names: Glutamyl Peptidase; Peptidase S9 Prolyl Oligopeptidase Active Site Region; Aminoacyl Peptidase; Peptidase S9A/B/C Family Catalytic Domain Protein; Prolyl Oligopeptidase; Serine Peptidase; Acylamino-Acid-Releasing; Exported Oligopeptidase; Prolyl Oligopeptidase Family Protein; X-Pro Dipeptidyl-Peptidase; Secreted Protein
Number of amino acids: Translated: 802; Mature: 802
Protein sequence:
>802_residues MLRLTLIGIWTMLCLIFIPNALAQDYQKPSPALQQTIAHNAALTTRLSNDHQWLALLSPIAAPSIATLAQPEQKLAGLRI AAEQYLPSRITQRYHQLKLISIQDNRQRLISLPGGHDITELQFSPDSRYLSYVSLTPEGGYLYVYDIAQNRHKRLSDNRL NGTISLDYQWANNNSLLARFVIASNTNASMAPTLYAPKTKETSGKQSPQRTYQDLLKTSADKQRFSQLTTSQLALVDMDG KLTNIAAPGIFEDFSLSPDGQYILTHQLTTPFSTQVKYYDFPILTEIYNLDGQRITQLHQSQSGESKPQGRDSVLPGPRM FHWVQGQGATLAFTEALDQGDSQQEAPLRDSLWQLDAPFTQKAKLIAKTPWRIIDIDWAENNIALVSQRNSKAQLLRLSR LDPHLGESSLYTLNERNLRDKYQELGKFPREYTQGKGLVIRVQQAQTAGVIHNGQGASPQGDKPFLKRTSLATGESSLLW QSATNQLESVRYVLNLEPLQLIINRESPTEAPSLVLIDGAKERVLYQQADELSAYRGMRKQLITYKRADGVPLSGTLYLP ANYTKEQGTLPVLMWAYPREFNDPDVAGQISFSANQYPSISPRGPIPLVAEGFAVFDKVSMPIIAQGDKEPNDSFREQLV ANAQAAVDTLVDLGIADRKQIAVGGHSYGAFMVANLLAHTDLFYAGIARSGAYNRSLTPFGFQNEERYYWQANDIYQQMS PFNYADNIKSPLLLVHGEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHGYAAKESLEHLLWEQSQFLKANLPST NL
Sequences:
>Translated_802_residues MLRLTLIGIWTMLCLIFIPNALAQDYQKPSPALQQTIAHNAALTTRLSNDHQWLALLSPIAAPSIATLAQPEQKLAGLRI AAEQYLPSRITQRYHQLKLISIQDNRQRLISLPGGHDITELQFSPDSRYLSYVSLTPEGGYLYVYDIAQNRHKRLSDNRL NGTISLDYQWANNNSLLARFVIASNTNASMAPTLYAPKTKETSGKQSPQRTYQDLLKTSADKQRFSQLTTSQLALVDMDG KLTNIAAPGIFEDFSLSPDGQYILTHQLTTPFSTQVKYYDFPILTEIYNLDGQRITQLHQSQSGESKPQGRDSVLPGPRM FHWVQGQGATLAFTEALDQGDSQQEAPLRDSLWQLDAPFTQKAKLIAKTPWRIIDIDWAENNIALVSQRNSKAQLLRLSR LDPHLGESSLYTLNERNLRDKYQELGKFPREYTQGKGLVIRVQQAQTAGVIHNGQGASPQGDKPFLKRTSLATGESSLLW QSATNQLESVRYVLNLEPLQLIINRESPTEAPSLVLIDGAKERVLYQQADELSAYRGMRKQLITYKRADGVPLSGTLYLP ANYTKEQGTLPVLMWAYPREFNDPDVAGQISFSANQYPSISPRGPIPLVAEGFAVFDKVSMPIIAQGDKEPNDSFREQLV ANAQAAVDTLVDLGIADRKQIAVGGHSYGAFMVANLLAHTDLFYAGIARSGAYNRSLTPFGFQNEERYYWQANDIYQQMS PFNYADNIKSPLLLVHGEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHGYAAKESLEHLLWEQSQFLKANLPST NL >Mature_802_residues MLRLTLIGIWTMLCLIFIPNALAQDYQKPSPALQQTIAHNAALTTRLSNDHQWLALLSPIAAPSIATLAQPEQKLAGLRI AAEQYLPSRITQRYHQLKLISIQDNRQRLISLPGGHDITELQFSPDSRYLSYVSLTPEGGYLYVYDIAQNRHKRLSDNRL NGTISLDYQWANNNSLLARFVIASNTNASMAPTLYAPKTKETSGKQSPQRTYQDLLKTSADKQRFSQLTTSQLALVDMDG KLTNIAAPGIFEDFSLSPDGQYILTHQLTTPFSTQVKYYDFPILTEIYNLDGQRITQLHQSQSGESKPQGRDSVLPGPRM FHWVQGQGATLAFTEALDQGDSQQEAPLRDSLWQLDAPFTQKAKLIAKTPWRIIDIDWAENNIALVSQRNSKAQLLRLSR LDPHLGESSLYTLNERNLRDKYQELGKFPREYTQGKGLVIRVQQAQTAGVIHNGQGASPQGDKPFLKRTSLATGESSLLW QSATNQLESVRYVLNLEPLQLIINRESPTEAPSLVLIDGAKERVLYQQADELSAYRGMRKQLITYKRADGVPLSGTLYLP ANYTKEQGTLPVLMWAYPREFNDPDVAGQISFSANQYPSISPRGPIPLVAEGFAVFDKVSMPIIAQGDKEPNDSFREQLV ANAQAAVDTLVDLGIADRKQIAVGGHSYGAFMVANLLAHTDLFYAGIARSGAYNRSLTPFGFQNEERYYWQANDIYQQMS PFNYADNIKSPLLLVHGEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHGYAAKESLEHLLWEQSQFLKANLPST NL
Specific function: Unknown
COG id: COG1506
COG function: function code E; Dipeptidyl aminopeptidases/acylaminoacyl-peptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89635; Mature: 89635
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRLTLIGIWTMLCLIFIPNALAQDYQKPSPALQQTIAHNAALTTRLSNDHQWLALLSPI CEEEEHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHH AAPSIATLAQPEQKLAGLRIAAEQYLPSRITQRYHQLKLISIQDNRQRLISLPGGHDITE CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCCCCEEE LQFSPDSRYLSYVSLTPEGGYLYVYDIAQNRHKRLSDNRLNGTISLDYQWANNNSLLARF EEECCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCCCCEEEEEEEEECCCCCEEEEE VIASNTNASMAPTLYAPKTKETSGKQSPQRTYQDLLKTSADKQRFSQLTTSQLALVDMDG EEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCC KLTNIAAPGIFEDFSLSPDGQYILTHQLTTPFSTQVKYYDFPILTEIYNLDGQRITQLHQ CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHH SQSGESKPQGRDSVLPGPRMFHWVQGQGATLAFTEALDQGDSQQEAPLRDSLWQLDAPFT HCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHCCCCCC QKAKLIAKTPWRIIDIDWAENNIALVSQRNSKAQLLRLSRLDPHLGESSLYTLNERNLRD HHHHEEECCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEECCCHHHH KYQELGKFPREYTQGKGLVIRVQQAQTAGVIHNGQGASPQGDKPFLKRTSLATGESSLLW HHHHHHCCCHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCHHHH QSATNQLESVRYVLNLEPLQLIINRESPTEAPSLVLIDGAKERVLYQQADELSAYRGMRK HHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH QLITYKRADGVPLSGTLYLPANYTKEQGTLPVLMWAYPREFNDPDVAGQISFSANQYPSI HHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCC SPRGPIPLVAEGFAVFDKVSMPIIAQGDKEPNDSFREQLVANAQAAVDTLVDLGIADRKQ CCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE IAVGGHSYGAFMVANLLAHTDLFYAGIARSGAYNRSLTPFGFQNEERYYWQANDIYQQMS EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCC PFNYADNIKSPLLLVHGEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHGYAAKE CCCCHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHH SLEHLLWEQSQFLKANLPSTNL HHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLRLTLIGIWTMLCLIFIPNALAQDYQKPSPALQQTIAHNAALTTRLSNDHQWLALLSPI CEEEEHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHH AAPSIATLAQPEQKLAGLRIAAEQYLPSRITQRYHQLKLISIQDNRQRLISLPGGHDITE CCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEECCCCCCEEE LQFSPDSRYLSYVSLTPEGGYLYVYDIAQNRHKRLSDNRLNGTISLDYQWANNNSLLARF EEECCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCCCCEEEEEEEEECCCCCEEEEE VIASNTNASMAPTLYAPKTKETSGKQSPQRTYQDLLKTSADKQRFSQLTTSQLALVDMDG EEEECCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCC KLTNIAAPGIFEDFSLSPDGQYILTHQLTTPFSTQVKYYDFPILTEIYNLDGQRITQLHQ CEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHCCCCHHHHHHHH SQSGESKPQGRDSVLPGPRMFHWVQGQGATLAFTEALDQGDSQQEAPLRDSLWQLDAPFT HCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEHHHHCCCCCCCCCCHHHHHHHCCCCCC QKAKLIAKTPWRIIDIDWAENNIALVSQRNSKAQLLRLSRLDPHLGESSLYTLNERNLRD HHHHEEECCCEEEEEEEECCCCEEEEEECCCHHHHHHHHHCCCCCCCCCEEEECCCHHHH KYQELGKFPREYTQGKGLVIRVQQAQTAGVIHNGQGASPQGDKPFLKRTSLATGESSLLW HHHHHHCCCHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCHHHH QSATNQLESVRYVLNLEPLQLIINRESPTEAPSLVLIDGAKERVLYQQADELSAYRGMRK HHHHHHHHHHHHEECCCEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH QLITYKRADGVPLSGTLYLPANYTKEQGTLPVLMWAYPREFNDPDVAGQISFSANQYPSI HHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCC SPRGPIPLVAEGFAVFDKVSMPIIAQGDKEPNDSFREQLVANAQAAVDTLVDLGIADRKQ CCCCCCCCCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE IAVGGHSYGAFMVANLLAHTDLFYAGIARSGAYNRSLTPFGFQNEERYYWQANDIYQQMS EEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCC PFNYADNIKSPLLLVHGEMDQNSGTFPLQSERLFDAIQGLGGKARLVILPFEGHGYAAKE CCCCHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHH SLEHLLWEQSQFLKANLPSTNL HHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA