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The map label for this gene is 117921460

Identifier: 117921460

GI number: 117921460

Start: 3627744

End: 3628280

Strand: Reverse

Name: 117921460

Synonym: Shewana3_3021

Alternate gene names: NA

Gene position: 3628280-3627744 (Counterclockwise)

Preceding gene: 117921461

Following gene: 117921457

Centisome position: 72.97

GC content: 43.2

Gene sequence:

>537_bases
ATGAAATCCGCCGTAGAGCAGCTATCAACCTATAAGAGTGTGCATTTAAATCAGCGCAATATACTAACCCATTTCGTTGG
TATCCCATTGATTATATGGTCTGCTTTCCTATTACTAGCGACTATCCGTATTCCACTTGGCAGCGCGAGTGATGTGAGTT
TAGGTGTGATTTTAGGGGCTGGTGTGCTGGTTTATTACTTTCGCTTACATGCAAAGTTAGCGATTGGCCTAGCTTTATTT
ATCGCCCCCGTCGTATATACGACTGAGCTAATGGCTGATTCTCCCAACGCCTTCTGGTTGTTTATATCGGTATTTATCGT
GGGATGGATTTTCCAGCTAATTGGCCATCAATACGAGAAGGCCAAACCCGCTTTTGTGGACGATTTAAACCAACTGCTAA
TTGGCCCATTTTTCTTAATGGCCGAAGTGTATTTTATCTTGGGGTTAGAAAAGGAGTTAGATGCCGAGATTACACCTATC
GCTATCGAAAAGCGCCGAGTACTCGAAGCACGTCTAAAGACGCAAAGCGTTAAATAA

Upstream 100 bases:

>100_bases
TTGTTACTTTTTACTGTTCAGTCTCGCATTTTTGGGCTAGGTTAGGTCAAAAGTGGTATCTAGACACTAATTTGCAGGGA
CACAGTAAAAGGAGCCCCAG

Downstream 100 bases:

>100_bases
TTTCTTGGGGGAGAAGGAAATCGGCTGATTCCATTTGGAACCAGCCGATTTTTTATCTACAAAAATTAGCGTGGCGACTG
ATAATGCTGCGGAATGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKSAVEQLSTYKSVHLNQRNILTHFVGIPLIIWSAFLLLATIRIPLGSASDVSLGVILGAGVLVYYFRLHAKLAIGLALF
IAPVVYTTELMADSPNAFWLFISVFIVGWIFQLIGHQYEKAKPAFVDDLNQLLIGPFFLMAEVYFILGLEKELDAEITPI
AIEKRRVLEARLKTQSVK

Sequences:

>Translated_178_residues
MKSAVEQLSTYKSVHLNQRNILTHFVGIPLIIWSAFLLLATIRIPLGSASDVSLGVILGAGVLVYYFRLHAKLAIGLALF
IAPVVYTTELMADSPNAFWLFISVFIVGWIFQLIGHQYEKAKPAFVDDLNQLLIGPFFLMAEVYFILGLEKELDAEITPI
AIEKRRVLEARLKTQSVK
>Mature_178_residues
MKSAVEQLSTYKSVHLNQRNILTHFVGIPLIIWSAFLLLATIRIPLGSASDVSLGVILGAGVLVYYFRLHAKLAIGLALF
IAPVVYTTELMADSPNAFWLFISVFIVGWIFQLIGHQYEKAKPAFVDDLNQLLIGPFFLMAEVYFILGLEKELDAEITPI
AIEKRRVLEARLKTQSVK

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321428, Length=170, Percent_Identity=30.5882352941176, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19934; Mature: 19934

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAVEQLSTYKSVHLNQRNILTHFVGIPLIIWSAFLLLATIRIPLGSASDVSLGVILGA
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GVLVYYFRLHAKLAIGLALFIAPVVYTTELMADSPNAFWLFISVFIVGWIFQLIGHQYEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHC
AKPAFVDDLNQLLIGPFFLMAEVYFILGLEKELDAEITPIAIEKRRVLEARLKTQSVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKSAVEQLSTYKSVHLNQRNILTHFVGIPLIIWSAFLLLATIRIPLGSASDVSLGVILGA
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GVLVYYFRLHAKLAIGLALFIAPVVYTTELMADSPNAFWLFISVFIVGWIFQLIGHQYEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHC
AKPAFVDDLNQLLIGPFFLMAEVYFILGLEKELDAEITPIAIEKRRVLEARLKTQSVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA