| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117921437
Identifier: 117921437
GI number: 117921437
Start: 3603699
End: 3604265
Strand: Reverse
Name: 117921437
Synonym: Shewana3_2998
Alternate gene names: NA
Gene position: 3604265-3603699 (Counterclockwise)
Preceding gene: 117921443
Following gene: 117921436
Centisome position: 72.49
GC content: 51.68
Gene sequence:
>567_bases ATGCAGCCAAAATCACATCACACTAAAACCCTTAAAGCCATGACCATGGCGCTGTTGGTCGGTTTATCCAGTGCCGCCCA TGCCGGAGCCGAGAGCTTTGCGCCTGGAACCGCCATCCCCGAATTTGGTGAAGTGGCTAAGGTCGAAAGCACCCTTGCGA TCCCTGCGGGGATGAAGTTTAAGGTGGCATTCGATATGAGTAAGGCGGCCGATGTCGGCCAAGTGAATCGTCAGCTCGAC AGCCTTGCCCGTTTTATCAATATGCACGTGGCTGCTGGCGTTAAAGAAAGCGATATTGAGCTAGCGATGGTGGTGCATGG CAGTGCCGTTGGCGATTTAGCCGATGATAGCTTTTATGCCAAGCAACACAACGGTGCGCAAAACCCCAATAAAGCCTTAG TGAAAACCTTAGTGGCCCACGGGGTGAAGTTTTATATCTGTGGTCAGAGCGCCGCTTATTTTGACTTACACAACGCCTCT TTGTTACCGGGTGTCGATATGGCCCTGTCTGCGATGACGGCCCATGCGATTCTAGCGCAGCAAGGATTTAGTCAAAATCC GTTTTAG
Upstream 100 bases:
>100_bases TAGGTTCTTTGGCGTTCATAGCGGTATCCATAGACTCAATCTTAAGGTGCTGTCGTTATCTATTAGCACGAAAAAATAAC AATAACAGGATGATAATATC
Downstream 100 bases:
>100_bases GGTAAATTTTTTGTTTGGAAACTTTTTTGTTTGGAAACTAGGCTCGCCTTGCTATTCTGTCGCTCGTAAGTTGATAATTA CAGTGAAGTAAATGGAATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MQPKSHHTKTLKAMTMALLVGLSSAAHAGAESFAPGTAIPEFGEVAKVESTLAIPAGMKFKVAFDMSKAADVGQVNRQLD SLARFINMHVAAGVKESDIELAMVVHGSAVGDLADDSFYAKQHNGAQNPNKALVKTLVAHGVKFYICGQSAAYFDLHNAS LLPGVDMALSAMTAHAILAQQGFSQNPF
Sequences:
>Translated_188_residues MQPKSHHTKTLKAMTMALLVGLSSAAHAGAESFAPGTAIPEFGEVAKVESTLAIPAGMKFKVAFDMSKAADVGQVNRQLD SLARFINMHVAAGVKESDIELAMVVHGSAVGDLADDSFYAKQHNGAQNPNKALVKTLVAHGVKFYICGQSAAYFDLHNAS LLPGVDMALSAMTAHAILAQQGFSQNPF >Mature_188_residues MQPKSHHTKTLKAMTMALLVGLSSAAHAGAESFAPGTAIPEFGEVAKVESTLAIPAGMKFKVAFDMSKAADVGQVNRQLD SLARFINMHVAAGVKESDIELAMVVHGSAVGDLADDSFYAKQHNGAQNPNKALVKTLVAHGVKFYICGQSAAYFDLHNAS LLPGVDMALSAMTAHAILAQQGFSQNPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19767; Mature: 19767
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPKSHHTKTLKAMTMALLVGLSSAAHAGAESFAPGTAIPEFGEVAKVESTLAIPAGMKF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCEE KVAFDMSKAADVGQVNRQLDSLARFINMHVAAGVKESDIELAMVVHGSAVGDLADDSFYA EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHH KQHNGAQNPNKALVKTLVAHGVKFYICGQSAAYFDLHNASLLPGVDMALSAMTAHAILAQ HHCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH QGFSQNPF CCCCCCCC >Mature Secondary Structure MQPKSHHTKTLKAMTMALLVGLSSAAHAGAESFAPGTAIPEFGEVAKVESTLAIPAGMKF CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHEECCCCCEE KVAFDMSKAADVGQVNRQLDSLARFINMHVAAGVKESDIELAMVVHGSAVGDLADDSFYA EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHH KQHNGAQNPNKALVKTLVAHGVKFYICGQSAAYFDLHNASLLPGVDMALSAMTAHAILAQ HHCCCCCCHHHHHHHHHHHCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHH QGFSQNPF CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA