| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117921431
Identifier: 117921431
GI number: 117921431
Start: 3598110
End: 3598745
Strand: Direct
Name: 117921431
Synonym: Shewana3_2992
Alternate gene names: NA
Gene position: 3598110-3598745 (Clockwise)
Preceding gene: 117921430
Following gene: 117921432
Centisome position: 72.36
GC content: 47.48
Gene sequence:
>636_bases ATGAATTCTCAAACCTATAACCAAGCCGTACTCGAACTCGCCCGCGCGGGTCTTGCCGATTTAACCGCCTCAGCCCAAGC TAAAAAAGCCCAACGAACTGCCGCGCAGGAGAGTCATTTTCTGTGTAACTGGATGGTTGAAGCGCTCAAAGAGAAGCGTT TCTCGAAACTGGTGGCCGACGATCTCACGGCATGGATCCGTATGGCGCGCAGCCAAGGTGCTGGCGCCGAGCTTAAGCGG TTATTGGAAAGAATTGTTCATCAATATCAGAGTGTTGAAAACTCGCACGTGGAGTTAGGTACAGCGTTAAACGCTATGAT TGCCGAGTTAACCCAGCTCGAATGGCTAGTGTTTACTGACACCGAAATTAACACCAAGCTTAAGCTAGACGCCGATGGCC AATCGAGCTTAGTTATTGATGTAAAAGAGTTTACTCAACACATCCAAGATAATCAGCTTATCAAGCCTATCAACTTATAT GTTCGTACCGATGAGCAGCTGCTGACTCAAATCGCCCTCTCCCATGGTTTGCTGATAAGCCAAGGTAATAAAAAGACCAG CCTGATTAAACACCATAAGACCTATCAAATTTACCCGCACAATCAGCTGCCCGCCTTGTGCCTACTCTTGGCTTAA
Upstream 100 bases:
>100_bases AATCGTTATCGATTTAGCGGCTGCTTTGCTAAACTAGCTTGGCCGCAATCGATACGACACGTTCCATTAGATCAATCCTT TAGCCCGCGGCGGAGCCACA
Downstream 100 bases:
>100_bases GCCCAAAAAGCTGCTTGAATAGGGAAACTGCGCTATGGATAACAATTTTTTCACAATGACTAGGTAAGATATAGCGCAGT CACCGCGAAGCTCGTTTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNSQTYNQAVLELARAGLADLTASAQAKKAQRTAAQESHFLCNWMVEALKEKRFSKLVADDLTAWIRMARSQGAGAELKR LLERIVHQYQSVENSHVELGTALNAMIAELTQLEWLVFTDTEINTKLKLDADGQSSLVIDVKEFTQHIQDNQLIKPINLY VRTDEQLLTQIALSHGLLISQGNKKTSLIKHHKTYQIYPHNQLPALCLLLA
Sequences:
>Translated_211_residues MNSQTYNQAVLELARAGLADLTASAQAKKAQRTAAQESHFLCNWMVEALKEKRFSKLVADDLTAWIRMARSQGAGAELKR LLERIVHQYQSVENSHVELGTALNAMIAELTQLEWLVFTDTEINTKLKLDADGQSSLVIDVKEFTQHIQDNQLIKPINLY VRTDEQLLTQIALSHGLLISQGNKKTSLIKHHKTYQIYPHNQLPALCLLLA >Mature_211_residues MNSQTYNQAVLELARAGLADLTASAQAKKAQRTAAQESHFLCNWMVEALKEKRFSKLVADDLTAWIRMARSQGAGAELKR LLERIVHQYQSVENSHVELGTALNAMIAELTQLEWLVFTDTEINTKLKLDADGQSSLVIDVKEFTQHIQDNQLIKPINLY VRTDEQLLTQIALSHGLLISQGNKKTSLIKHHKTYQIYPHNQLPALCLLLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23772; Mature: 23772
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSQTYNQAVLELARAGLADLTASAQAKKAQRTAAQESHFLCNWMVEALKEKRFSKLVAD CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLTAWIRMARSQGAGAELKRLLERIVHQYQSVENSHVELGTALNAMIAELTQLEWLVFTD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEC TEINTKLKLDADGQSSLVIDVKEFTQHIQDNQLIKPINLYVRTDEQLLTQIALSHGLLIS CCCCEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCEEEE QGNKKTSLIKHHKTYQIYPHNQLPALCLLLA CCCCHHHHHHHCCEEEECCCCCCHHHHHHCC >Mature Secondary Structure MNSQTYNQAVLELARAGLADLTASAQAKKAQRTAAQESHFLCNWMVEALKEKRFSKLVAD CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DLTAWIRMARSQGAGAELKRLLERIVHQYQSVENSHVELGTALNAMIAELTQLEWLVFTD HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEC TEINTKLKLDADGQSSLVIDVKEFTQHIQDNQLIKPINLYVRTDEQLLTQIALSHGLLIS CCCCEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHCCEEEE QGNKKTSLIKHHKTYQIYPHNQLPALCLLLA CCCCHHHHHHHCCEEEECCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA