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The map label for this gene is yhaM [C]

Identifier: 117921411

GI number: 117921411

Start: 3572642

End: 3573916

Strand: Direct

Name: yhaM [C]

Synonym: Shewana3_2972

Alternate gene names: 117921411

Gene position: 3572642-3573916 (Clockwise)

Preceding gene: 117921410

Following gene: 117921412

Centisome position: 71.85

GC content: 51.37

Gene sequence:

>1275_bases
ATGAAACCTCTATGGCAGCAATACATTCAGATCATTAACCAAGTGGTTAAACCCGCCTTAGGCTGTACCGAGCCGATCGC
CGCGGCCTATGCGGCAGCCGTAGCACGCACCTTATTACCGGTAGCACCCGAGTCAATTGCGGTGCAAGTTTCTGATAACT
TGTATAAAAACTCGATGGGTGTTTATGTGCCCGGTACAGGTAAAATCGGTCTCGCTATCGCCGCAGCCGCAGGCGCGCTT
GCAGGTAATGCCGATGCGGGATTAGAAGTCTTGGCCAACGTGACGCCTGAACAAGTGGCACAGGCACAAACCCTTATCGA
TGCGGGTAAAGTGAAGGTTGAGCGTACCGAGACCGACGAATTTATCTATTGCTGCGTCAGCTTAACCGCTGGCGAGCAAG
AGGCCATGGTGAAAATCTGTGGCGGCCATACCTTGATTGCCGAGAAGCGCTTAAATGGTGAGTTAGTATTTACCGCCGAT
AGCGCCCAAGCCAAGGCTACAGGCTCAATCTGCGACGGCGTCGATATCAATATTGAATCGATTTACCGCTTCGCCCAAGA
AGTGCCCTTCGAAGAAATCCAATTTATTCTTAAAGCCTCGGAATTAAACAGTAAATTATCCGATGAAGGCATGTCCAAAC
CCTATGGCTTGGAAGTCGGCCGCACCATGAAGAACGGCATTGCTGCGGGGATCATCGGTGAGGACTTACTCAACAAGATT
GTGATGCTCACCGCGGCGGCTTCGGATGCGCGTATGGGCGGTGCCAATCTGCCCGCCATGAGCAATTTAGGCAGTGGTAA
CCAAGGAATTGCGGCGACGATTCCAGTAGTCATCACCGCCCAGTGTTATAAAGTCAGCGAAGAGAAACTGGCTCGCGCGC
TGATCATGAGCCACCTCGGGGCGATTTATATCAAATCCCACTATCCACCGTTATCGGCATTCTGTGGCAATACGGTCACT
AGCGCTGCCGCCTCTATGGCCATGGTGTATTTAGCGGGCGGCAGTTTCGAGCAATCCTGCTTTGCGATTCAAAACGTCAT
CAGCGACAGCTCGGGCATGGTCTGTGATGGTGCCAAAGCCTCCTGCGCGATGAAGGTCAGTACCTCATCGAGTGCGGCGG
TGCGCTCCTTCTTAATGGCGCTCAACAGCCAAAACGTTTCAGGCCAAGGTATCATCGCCAAAGATGTTGAGAAAACCATT
AAGAACATAGGCAAGATGGTACTCAATGGCATGTCATCTACGGATGTCACTATCATTAACATCATGTCTGAATAA

Upstream 100 bases:

>100_bases
CCCGCAGCTGTTTTGCGGTAAAAGATCTTCCACTGGGTGTCAAAGTGGAAGTTGAAGCCATCGCCCACGTTCACGCATAA
ATTGGTAAGGTTGTAGCCCG

Downstream 100 bases:

>100_bases
GACGGTTATTCCTGATAAGCAGCTGAAAAGGTAAGAATATTGTGAAATTGCAAGACTTAACCCAAAGCGATCTGGATATA
CTCAAGTCCATCGAAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKPLWQQYIQIINQVVKPALGCTEPIAAAYAAAVARTLLPVAPESIAVQVSDNLYKNSMGVYVPGTGKIGLAIAAAAGAL
AGNADAGLEVLANVTPEQVAQAQTLIDAGKVKVERTETDEFIYCCVSLTAGEQEAMVKICGGHTLIAEKRLNGELVFTAD
SAQAKATGSICDGVDINIESIYRFAQEVPFEEIQFILKASELNSKLSDEGMSKPYGLEVGRTMKNGIAAGIIGEDLLNKI
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVITAQCYKVSEEKLARALIMSHLGAIYIKSHYPPLSAFCGNTVT
SAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKASCAMKVSTSSSAAVRSFLMALNSQNVSGQGIIAKDVEKTI
KNIGKMVLNGMSSTDVTIINIMSE

Sequences:

>Translated_424_residues
MKPLWQQYIQIINQVVKPALGCTEPIAAAYAAAVARTLLPVAPESIAVQVSDNLYKNSMGVYVPGTGKIGLAIAAAAGAL
AGNADAGLEVLANVTPEQVAQAQTLIDAGKVKVERTETDEFIYCCVSLTAGEQEAMVKICGGHTLIAEKRLNGELVFTAD
SAQAKATGSICDGVDINIESIYRFAQEVPFEEIQFILKASELNSKLSDEGMSKPYGLEVGRTMKNGIAAGIIGEDLLNKI
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVITAQCYKVSEEKLARALIMSHLGAIYIKSHYPPLSAFCGNTVT
SAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKASCAMKVSTSSSAAVRSFLMALNSQNVSGQGIIAKDVEKTI
KNIGKMVLNGMSSTDVTIINIMSE
>Mature_424_residues
MKPLWQQYIQIINQVVKPALGCTEPIAAAYAAAVARTLLPVAPESIAVQVSDNLYKNSMGVYVPGTGKIGLAIAAAAGAL
AGNADAGLEVLANVTPEQVAQAQTLIDAGKVKVERTETDEFIYCCVSLTAGEQEAMVKICGGHTLIAEKRLNGELVFTAD
SAQAKATGSICDGVDINIESIYRFAQEVPFEEIQFILKASELNSKLSDEGMSKPYGLEVGRTMKNGIAAGIIGEDLLNKI
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVITAQCYKVSEEKLARALIMSHLGAIYIKSHYPPLSAFCGNTVT
SAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKASCAMKVSTSSSAAVRSFLMALNSQNVSGQGIIAKDVEKTI
KNIGKMVLNGMSSTDVTIINIMSE

Specific function: Unknown

COG id: COG3681

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral membrane protein (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0597 family [H]

Homologues:

Organism=Escherichia coli, GI48994923, Length=427, Percent_Identity=48.2435597189695, Blast_Score=362, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005130
- InterPro:   IPR021144 [H]

Pfam domain/function: PF03313 SDH_alpha [H]

EC number: NA

Molecular weight: Translated: 44185; Mature: 44185

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLWQQYIQIINQVVKPALGCTEPIAAAYAAAVARTLLPVAPESIAVQVSDNLYKNSMG
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCC
VYVPGTGKIGLAIAAAAGALAGNADAGLEVLANVTPEQVAQAQTLIDAGKVKVERTETDE
EEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCC
FIYCCVSLTAGEQEAMVKICGGHTLIAEKRLNGELVFTADSAQAKATGSICDGVDINIES
EEEEEEEECCCCHHHHEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHH
IYRFAQEVPFEEIQFILKASELNSKLSDEGMSKPYGLEVGRTMKNGIAAGIIGEDLLNKI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVITAQCYKVSEEKLARALIMSHLG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEHHHHCCHHHHHHHHHHHHHC
AIYIKSHYPPLSAFCGNTVTSAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKA
EEEEECCCCCHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCC
SCAMKVSTSSSAAVRSFLMALNSQNVSGQGIIAKDVEKTIKNIGKMVLNGMSSTDVTIIN
CEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEE
IMSE
EECC
>Mature Secondary Structure
MKPLWQQYIQIINQVVKPALGCTEPIAAAYAAAVARTLLPVAPESIAVQVSDNLYKNSMG
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCC
VYVPGTGKIGLAIAAAAGALAGNADAGLEVLANVTPEQVAQAQTLIDAGKVKVERTETDE
EEECCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCC
FIYCCVSLTAGEQEAMVKICGGHTLIAEKRLNGELVFTADSAQAKATGSICDGVDINIES
EEEEEEEECCCCHHHHEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCHHH
IYRFAQEVPFEEIQFILKASELNSKLSDEGMSKPYGLEVGRTMKNGIAAGIIGEDLLNKI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHH
VMLTAAASDARMGGANLPAMSNLGSGNQGIAATIPVVITAQCYKVSEEKLARALIMSHLG
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECEEEEEHHHHCCHHHHHHHHHHHHHC
AIYIKSHYPPLSAFCGNTVTSAAASMAMVYLAGGSFEQSCFAIQNVISDSSGMVCDGAKA
EEEEECCCCCHHHHHCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHCCCCCCEECCCCC
SCAMKVSTSSSAAVRSFLMALNSQNVSGQGIIAKDVEKTIKNIGKMVLNGMSSTDVTIIN
CEEEEECCCCHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCEEEEE
IMSE
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]