Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921379

Identifier: 117921379

GI number: 117921379

Start: 3530192

End: 3530566

Strand: Direct

Name: 117921379

Synonym: Shewana3_2939

Alternate gene names: NA

Gene position: 3530192-3530566 (Clockwise)

Preceding gene: 117921378

Following gene: 117921380

Centisome position: 71.0

GC content: 42.93

Gene sequence:

>375_bases
ATGACAGCAATTACTCATGTATATAACTACACAGTTAGATGTCCGCATTACAAAGATCCCGAACATCCAGTGAGTTGGTT
AAATCACATCGAATTAAACCAATCCAGTGAAATTGCCTTAAACCGTATCACCAAATGGCACGAACTCTCAGGCAGTAAAT
CCTTCGAAACCAGTAAGTTTGTTGTCCGTAAAGCCGATAATGAAGAAGCCTACTTCTCCATGCAGAGCGATAGGCTTAAA
AATGATGGTCACGCGCTCGTCACCTTTAAAATCTTCCTCGATACCTGCTGTGACGAGGCTGCGCCAGAAGAAATTATGCA
GCACCTGATTGATGACTATCAGCAGCGTTTAGCAAAACTCGATCAAGCCTCATAG

Upstream 100 bases:

>100_bases
ACTGTGATTTAACTCGGGCGATATCAGCGCAATTAATGATTGACCGAATTCAAAAACGATGCCTATGATGGCAGCAACAT
CCTCAACAGGTAGGTACGCT

Downstream 100 bases:

>100_bases
TGTTTTGCTTGAGAGTGATGTATCACATAAGCGATTAATCGCTAAGTGAAATAGCAACAATGCCAGAGTTTATACTCTGG
CATTTTGTTTTACTCACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTAITHVYNYTVRCPHYKDPEHPVSWLNHIELNQSSEIALNRITKWHELSGSKSFETSKFVVRKADNEEAYFSMQSDRLK
NDGHALVTFKIFLDTCCDEAAPEEIMQHLIDDYQQRLAKLDQAS

Sequences:

>Translated_124_residues
MTAITHVYNYTVRCPHYKDPEHPVSWLNHIELNQSSEIALNRITKWHELSGSKSFETSKFVVRKADNEEAYFSMQSDRLK
NDGHALVTFKIFLDTCCDEAAPEEIMQHLIDDYQQRLAKLDQAS
>Mature_123_residues
TAITHVYNYTVRCPHYKDPEHPVSWLNHIELNQSSEIALNRITKWHELSGSKSFETSKFVVRKADNEEAYFSMQSDRLKN
DGHALVTFKIFLDTCCDEAAPEEIMQHLIDDYQQRLAKLDQAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14431; Mature: 14300

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAITHVYNYTVRCPHYKDPEHPVSWLNHIELNQSSEIALNRITKWHELSGSKSFETSKF
CCCEEEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
VVRKADNEEAYFSMQSDRLKNDGHALVTFKIFLDTCCDEAAPEEIMQHLIDDYQQRLAKL
EEEECCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DQAS
CCCC
>Mature Secondary Structure 
TAITHVYNYTVRCPHYKDPEHPVSWLNHIELNQSSEIALNRITKWHELSGSKSFETSKF
CCEEEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
VVRKADNEEAYFSMQSDRLKNDGHALVTFKIFLDTCCDEAAPEEIMQHLIDDYQQRLAKL
EEEECCCCCCEEEECCCCCCCCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
DQAS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA