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The map label for this gene is glgA [H]

Identifier: 117921370

GI number: 117921370

Start: 3513871

End: 3515460

Strand: Reverse

Name: glgA [H]

Synonym: Shewana3_2930

Alternate gene names: 117921370

Gene position: 3515460-3513871 (Counterclockwise)

Preceding gene: 117921371

Following gene: 117921369

Centisome position: 70.7

GC content: 52.89

Gene sequence:

>1590_bases
ATGGTCGCGGCGGAAAATGGGGCGCTGAAAGGGGCGAAAGTGGGCGGTATGGCGGATGTGATCCGTGACTTGCCTCAAGC
GCTCGCGGGTGTTGGGATCCAAGCCGATATAATTATGCCAAGCTACGGATTTTTAACGGACCTTGGAGCCAAACTTATCC
ATGAGTTTGAGGTGAGTTTTGCTGGGCGACAGGAGCCAATTAAGTTGTATTGGCTAGCGCACCCTAAGGTGCAGGGCGCC
AATATTTACTTGCTCGAGCATGGGCTCTGGCAATCGAGCCCTGGACAGATTTATAGCCAAGGCACGAGCGACCGCCCCTT
TGCCGATGATGCGACTAAGTTTGCGCTTTTGTGTGCAAGCGTAGCCAAAGCCTTAGTGGCAGGGCTTGTGCCTATGCCAG
AGCTTTTACATCTGCACGACTGGCACACTGGATGTTTAGCCATGCTGCGGGCGCTGGCGCCTGAGTATCAAGCATTGCAA
AGCATAGAATGTGTGTTTTCGATTCATAACCTTGCGCTGCAGGGGATAAGGCCGCTGAGCCATGATACCTCAAGCTTTGC
GGCTTGGTTCCCTCACTTATTCGCCCAGTTAGATGAGGGCCAACGCGCCCAGATTATCGATCCCCGCTATCCCCACTGCA
TCAACCCTATGCGGATGGGGATAACGCTGGCGGATAAGGTTCATCTCGTCTCACCGACCTACGCCAAGGAGGTATTGCTT
CCCTCCCGCCCCGAGTTGGGTTTCTTCGGTGGTGAAGGCTTGGAGGCAGATTTACAACGCAAAGCCGAGCAGGGGCGAGT
GCTTGGTATTTTAAACGGTTGTGAATACCCTGAAACCTTGGCCCAAACCTCCCTCGAACGTATGGGATTAACTGAGTTTA
AGGCGTTACTGAGTTGCATCGAGTCGGCCCTAGTGCAGTGGCTGGGCGGGCGAACTCAGGTGAGCGGCGTCGATATGATT
GCTTTTATGCGGCTACAAGCCCTGTGGCGTCAGGCCTCTGCGGGGGAGTTTCCGGACTTTGTGTTGACCTCGGTTGGTCG
GCTGACCGATCAAAAAGTGCTGATCCTGCGCCATATTTTACCTTCTGGCTTATCGGTATTAGAGACGTTATTGCAACATT
TGCCGCAAACCCAGCCTAAGGCACTGTTTGTACTACTGGGCAGTGGCGACCCTGAGATAGGGCTGTTTTTTCAAACTCTT
GCGGCTAAGTATGCCCATTTTGTGTTTCTGCTGGGATACCATGAGGAGCTCTCACAGTGTCTTTATCAACTGGGTGATTT
ATTCCTGATGCCAAGCTCCTTCGAACCTTGCGGCATCAGCCAAATGCTCGCCATGCGTAGCGGTCAGCCTTGCCTAGTGC
ATGGTGTGGGCGGATTGCGGGATACGGTCGAGGACAATGTCGATGGCTTTGTGTTCTATGGCGAGGATATCAAGACGCAG
GGTGAGGCGTTACTAGTAAAGCTTGGCGACGCATTGGAGTCATTTGGCGCTGGTGATTGGATGCAATACAAGCGTAATGC
CAAAGTGCGGCGCTTTGATTGGCGTAGCATCGCCCTCGAATACAAGAAACAACTCTACAACATTTTGTGA

Upstream 100 bases:

>100_bases
GATATGTTAGGGCTACCCGTGGGCTATGAGTAAGGCCAAGTCGATAATCTGCTTGAATATTAACCCTGTTGGAGTTTGAA
GTTAGGTGAAACGCATATTA

Downstream 100 bases:

>100_bases
GTTACCCCTTGTAATTAGACCATGATTTGTAAGCAATTCTGCTACACTTGTGAGGGAGAGTTTTCGTAAGATAATCCGTT
CCCTCATTTTTGGAGTTGCT

Product: starch synthase catalytic subunit

Products: NA

Alternate protein names: Starch [bacterial glycogen] synthase [H]

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MVAAENGALKGAKVGGMADVIRDLPQALAGVGIQADIIMPSYGFLTDLGAKLIHEFEVSFAGRQEPIKLYWLAHPKVQGA
NIYLLEHGLWQSSPGQIYSQGTSDRPFADDATKFALLCASVAKALVAGLVPMPELLHLHDWHTGCLAMLRALAPEYQALQ
SIECVFSIHNLALQGIRPLSHDTSSFAAWFPHLFAQLDEGQRAQIIDPRYPHCINPMRMGITLADKVHLVSPTYAKEVLL
PSRPELGFFGGEGLEADLQRKAEQGRVLGILNGCEYPETLAQTSLERMGLTEFKALLSCIESALVQWLGGRTQVSGVDMI
AFMRLQALWRQASAGEFPDFVLTSVGRLTDQKVLILRHILPSGLSVLETLLQHLPQTQPKALFVLLGSGDPEIGLFFQTL
AAKYAHFVFLLGYHEELSQCLYQLGDLFLMPSSFEPCGISQMLAMRSGQPCLVHGVGGLRDTVEDNVDGFVFYGEDIKTQ
GEALLVKLGDALESFGAGDWMQYKRNAKVRRFDWRSIALEYKKQLYNIL

Sequences:

>Translated_529_residues
MVAAENGALKGAKVGGMADVIRDLPQALAGVGIQADIIMPSYGFLTDLGAKLIHEFEVSFAGRQEPIKLYWLAHPKVQGA
NIYLLEHGLWQSSPGQIYSQGTSDRPFADDATKFALLCASVAKALVAGLVPMPELLHLHDWHTGCLAMLRALAPEYQALQ
SIECVFSIHNLALQGIRPLSHDTSSFAAWFPHLFAQLDEGQRAQIIDPRYPHCINPMRMGITLADKVHLVSPTYAKEVLL
PSRPELGFFGGEGLEADLQRKAEQGRVLGILNGCEYPETLAQTSLERMGLTEFKALLSCIESALVQWLGGRTQVSGVDMI
AFMRLQALWRQASAGEFPDFVLTSVGRLTDQKVLILRHILPSGLSVLETLLQHLPQTQPKALFVLLGSGDPEIGLFFQTL
AAKYAHFVFLLGYHEELSQCLYQLGDLFLMPSSFEPCGISQMLAMRSGQPCLVHGVGGLRDTVEDNVDGFVFYGEDIKTQ
GEALLVKLGDALESFGAGDWMQYKRNAKVRRFDWRSIALEYKKQLYNIL
>Mature_529_residues
MVAAENGALKGAKVGGMADVIRDLPQALAGVGIQADIIMPSYGFLTDLGAKLIHEFEVSFAGRQEPIKLYWLAHPKVQGA
NIYLLEHGLWQSSPGQIYSQGTSDRPFADDATKFALLCASVAKALVAGLVPMPELLHLHDWHTGCLAMLRALAPEYQALQ
SIECVFSIHNLALQGIRPLSHDTSSFAAWFPHLFAQLDEGQRAQIIDPRYPHCINPMRMGITLADKVHLVSPTYAKEVLL
PSRPELGFFGGEGLEADLQRKAEQGRVLGILNGCEYPETLAQTSLERMGLTEFKALLSCIESALVQWLGGRTQVSGVDMI
AFMRLQALWRQASAGEFPDFVLTSVGRLTDQKVLILRHILPSGLSVLETLLQHLPQTQPKALFVLLGSGDPEIGLFFQTL
AAKYAHFVFLLGYHEELSQCLYQLGDLFLMPSSFEPCGISQMLAMRSGQPCLVHGVGGLRDTVEDNVDGFVFYGEDIKTQ
GEALLVKLGDALESFGAGDWMQYKRNAKVRRFDWRSIALEYKKQLYNIL

Specific function: Synthesizes alpha-1,4-glucan chains using ADP-glucose [H]

COG id: COG0297

COG function: function code G; Glycogen synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789836, Length=537, Percent_Identity=30.3538175046555, Blast_Score=148, Evalue=8e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011835
- InterPro:   IPR001296
- InterPro:   IPR013534 [H]

Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]

EC number: =2.4.1.21 [H]

Molecular weight: Translated: 58356; Mature: 58356

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAAENGALKGAKVGGMADVIRDLPQALAGVGIQADIIMPSYGFLTDLGAKLIHEFEVSF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
AGRQEPIKLYWLAHPKVQGANIYLLEHGLWQSSPGQIYSQGTSDRPFADDATKFALLCAS
CCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHH
VAKALVAGLVPMPELLHLHDWHTGCLAMLRALAPEYQALQSIECVFSIHNLALQGIRPLS
HHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC
HDTSSFAAWFPHLFAQLDEGQRAQIIDPRYPHCINPMRMGITLADKVHLVSPTYAKEVLL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCEEEECCEEECCCHHHHHHCC
PSRPELGFFGGEGLEADLQRKAEQGRVLGILNGCEYPETLAQTSLERMGLTEFKALLSCI
CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHH
ESALVQWLGGRTQVSGVDMIAFMRLQALWRQASAGEFPDFVLTSVGRLTDQKVLILRHIL
HHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
PSGLSVLETLLQHLPQTQPKALFVLLGSGDPEIGLFFQTLAAKYAHFVFLLGYHEELSQC
HCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQLGDLFLMPSSFEPCGISQMLAMRSGQPCLVHGVGGLRDTVEDNVDGFVFYGEDIKTQ
HHHHCCEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHCCCCEEEEECCCCCCC
GEALLVKLGDALESFGAGDWMQYKRNAKVRRFDWRSIALEYKKQLYNIL
CCEEEEEHHHHHHHCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVAAENGALKGAKVGGMADVIRDLPQALAGVGIQADIIMPSYGFLTDLGAKLIHEFEVSF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHC
AGRQEPIKLYWLAHPKVQGANIYLLEHGLWQSSPGQIYSQGTSDRPFADDATKFALLCAS
CCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHH
VAKALVAGLVPMPELLHLHDWHTGCLAMLRALAPEYQALQSIECVFSIHNLALQGIRPLS
HHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCC
HDTSSFAAWFPHLFAQLDEGQRAQIIDPRYPHCINPMRMGITLADKVHLVSPTYAKEVLL
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCEEEECCEEECCCHHHHHHCC
PSRPELGFFGGEGLEADLQRKAEQGRVLGILNGCEYPETLAQTSLERMGLTEFKALLSCI
CCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHH
ESALVQWLGGRTQVSGVDMIAFMRLQALWRQASAGEFPDFVLTSVGRLTDQKVLILRHIL
HHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHH
PSGLSVLETLLQHLPQTQPKALFVLLGSGDPEIGLFFQTLAAKYAHFVFLLGYHEELSQC
HCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYQLGDLFLMPSSFEPCGISQMLAMRSGQPCLVHGVGGLRDTVEDNVDGFVFYGEDIKTQ
HHHHCCEEECCCCCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHCCCCEEEEECCCCCCC
GEALLVKLGDALESFGAGDWMQYKRNAKVRRFDWRSIALEYKKQLYNIL
CCEEEEEHHHHHHHCCCCCHHHHHHCCCEEEEHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14621292 [H]