Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921357

Identifier: 117921357

GI number: 117921357

Start: 3494322

End: 3494999

Strand: Direct

Name: 117921357

Synonym: Shewana3_2917

Alternate gene names: NA

Gene position: 3494322-3494999 (Clockwise)

Preceding gene: 117921356

Following gene: 117921358

Centisome position: 70.28

GC content: 49.56

Gene sequence:

>678_bases
ATGGAACTTGATATTGATGTCATTCTGGCTGACTTAAAAGATGGCAAAGTACCTCGCACGCAGCAAAACCTCGATAAGCT
CAACGACACGCTGAAAGCCTATGCGGGATCAGGTCAGCGCGACTTCTCCATTACCCAGATTGGACGGGTGTCTGCCGAAA
ATGGCGGGTTGGCGTATGAGGCTTTGCGTGCTACCCGTAACAAGCACTACAGAACACTCATCGAAGCGTGGGCGGCAAAG
TACAATACCAGTACCAAAAAACCGCTATCTAACACCTCACGGTCTAAATCCATCCCTGTGGATAACAAGCTATTAGAGCG
CATCCCAGACCCTGCGGTACGCGCCTTGTTTGGTCAAATTATTGCCGAGCGCAACCGCTACCGCAAAGAGGTCAATTTAC
TCAAGCAACACGCTAATATTACCATCGACAAACGCCCTGTGCGCCAGTTTGACACCACCGCAGAACCAAGCGTGGAAGTG
CTGCCATCCCTATCAGGCGTACTCACCGAATCAGAGAAAAAAGCCTTAGCGTATGCCATTTCTGATGAATGTATGGAAAA
GAACGCCTGGCAAACTACTCAGGCTGGTCAGGTAAAAGACATGGAATACAACAGCGAAGTATTCCCTAGGGGCTTTGTCA
CAGGACTTCGCAAGCTCTTGGGTGAGGTAGATGACTAA

Upstream 100 bases:

>100_bases
ACCTGACTGATAACAATCTGTTCTCTCAGGGCATTCATGCACTGACTGATAAAGTCATTAATCTAGATGGCATAGCACTA
CCGAACTTATTGGAGGACTA

Downstream 100 bases:

>100_bases
TGGCAAGTGGGCAGCAGAAAGCGCAACAAAACCTTGAGGCATTTGAGGTCTGGAAAGCCACACAGACGGACGATGATTTT
AAACAACTAGTGTTCCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: Alpha/Beta Hydrolase Fold Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MELDIDVILADLKDGKVPRTQQNLDKLNDTLKAYAGSGQRDFSITQIGRVSAENGGLAYEALRATRNKHYRTLIEAWAAK
YNTSTKKPLSNTSRSKSIPVDNKLLERIPDPAVRALFGQIIAERNRYRKEVNLLKQHANITIDKRPVRQFDTTAEPSVEV
LPSLSGVLTESEKKALAYAISDECMEKNAWQTTQAGQVKDMEYNSEVFPRGFVTGLRKLLGEVDD

Sequences:

>Translated_225_residues
MELDIDVILADLKDGKVPRTQQNLDKLNDTLKAYAGSGQRDFSITQIGRVSAENGGLAYEALRATRNKHYRTLIEAWAAK
YNTSTKKPLSNTSRSKSIPVDNKLLERIPDPAVRALFGQIIAERNRYRKEVNLLKQHANITIDKRPVRQFDTTAEPSVEV
LPSLSGVLTESEKKALAYAISDECMEKNAWQTTQAGQVKDMEYNSEVFPRGFVTGLRKLLGEVDD
>Mature_225_residues
MELDIDVILADLKDGKVPRTQQNLDKLNDTLKAYAGSGQRDFSITQIGRVSAENGGLAYEALRATRNKHYRTLIEAWAAK
YNTSTKKPLSNTSRSKSIPVDNKLLERIPDPAVRALFGQIIAERNRYRKEVNLLKQHANITIDKRPVRQFDTTAEPSVEV
LPSLSGVLTESEKKALAYAISDECMEKNAWQTTQAGQVKDMEYNSEVFPRGFVTGLRKLLGEVDD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25240; Mature: 25240

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDIDVILADLKDGKVPRTQQNLDKLNDTLKAYAGSGQRDFSITQIGRVSAENGGLAYE
CCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHH
ALRATRNKHYRTLIEAWAAKYNTSTKKPLSNTSRSKSIPVDNKLLERIPDPAVRALFGQI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
IAERNRYRKEVNLLKQHANITIDKRPVRQFDTTAEPSVEVLPSLSGVLTESEKKALAYAI
HHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SDECMEKNAWQTTQAGQVKDMEYNSEVFPRGFVTGLRKLLGEVDD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MELDIDVILADLKDGKVPRTQQNLDKLNDTLKAYAGSGQRDFSITQIGRVSAENGGLAYE
CCCCHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCHHHH
ALRATRNKHYRTLIEAWAAKYNTSTKKPLSNTSRSKSIPVDNKLLERIPDPAVRALFGQI
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHH
IAERNRYRKEVNLLKQHANITIDKRPVRQFDTTAEPSVEVLPSLSGVLTESEKKALAYAI
HHHHHHHHHHHHHHHHHCCCEECCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
SDECMEKNAWQTTQAGQVKDMEYNSEVFPRGFVTGLRKLLGEVDD
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA