Click here to switch to the map view.

The map label for this gene is 117921356

Identifier: 117921356

GI number: 117921356

Start: 3491653

End: 3494322

Strand: Direct

Name: 117921356

Synonym: Shewana3_2916

Alternate gene names: NA

Gene position: 3491653-3494322 (Clockwise)

Preceding gene: 117921355

Following gene: 117921357

Centisome position: 70.22

GC content: 46.25

Gene sequence:

>2670_bases
ATGGGGCGAACTAAAGGTAAAAAAGCGGACGGACGCACATCGGATTTAACCTTCTCTTGGATGCTCACCACGCTCGGTGC
GGAGTGGCAGCAATGGCAGGAACTGGCGGCTGAGTGGATGGCAGAACAAACCACTGGTATTGACCATAAACAACAAGCTA
TGGCTCGCTTCTTCGAATCCTACCTTGTTGAATGTGCACCCTATGCCATCAGCAATATTGACCTGTTCTTTCAGGGTTAT
AACGGTCATCGATGCTCTAGTGAACAGTTGGAGACTGTGGTAAAGAAGACACAGAATACAGCTACTATCATCCAAAAAGG
CGTAAATTATCCATGTGACTTCATCGACTTTGTTATTGAAAAAGTGTTCTCAGAAGAAGATGACAATGGCAATTTTGTGC
CACTGGTTCAAAACCCGCTTAATAAAATCAAAGTGCAAGGTTCTACGACTGAAACCGTTCGTAACCCTCTGCCGTATCGC
TATATTCAGGACTTGCGCCAAATTCTCTGTCCGTTGCCTGATAAAACCGAATTAACCGTCATTGAGCAAAATCTCAAGGA
AGATGAACAACTACTTCCTGCTTATCACTACCGCCACTTCAAGCACTGGACATGGGCGCAACGACAATCAGGACAAGGAG
AAAGAGGTGGTGATGGTGACTGGTTTGAAGTGGAACCTGAGCGGATTGATAAAACCGACCCTGACTGCGTGTGGCGCACC
AACGAAGTGACTCGCAAAGGTAATAAAATCACCGTTCATCAAATCTGGTCGCCCGTCAAAGCGATGGTGATTTTCATGAA
GCTCCACCTACCACTGCGTACCTATCAGGTGCGTATGCTAGACAGCGGTGAAGCGGATACATGGCGCTATGAAAACGGTC
AGTGGGTAGTAAACACTCAGCATGATTTTGCACTTGGTAGCGAAAAACGCCCGTTCGGGAAAGGCATGTTCCGACGCATT
CACGACACCATGACAGGATTACATTCCACAGGCTTGTATATCAACACCAACAAAACCGCCGACCAGAACAAAGACGAACT
AGAGCGTGGTTACATCATTCCTTGGCAAAACGAGGAAGTGCTGTACTGGCTGGAAAAACTGCGCAACTGGCAAGAAAAAT
ACAATCCAATTTCTAAACCAACCGACTGCACTACGCTGCTAATAAAGCACACTCGTAAGAAAAAGTCTGAAAAGCAACTA
GAAAGCATGGGGGAAATTGCATTTCTGTTTCGCGATGCGTCAGCAAAGGGGGAGGATAAATTCAAGCCAATTAATTACAA
CGCAACAGATTCTTTTTGGTATCAACTCCTATTGACGCTGGAAAACCAACTCGCAGAGCAAGGCAATACACTGGATAACG
GCGAGCGCTTGAAACTGGTTGTGGACTACCCAGAGGGTACGCCAGAATGGAATAAGGTTGCCACACTCTTTCCATTACAC
AGTTTGCGTGTCTCACTCATCACGGCGTATACGATGGATACGCAATTGCCATTGCCTGTGATTTCTAAGCTATTGGCAGG
ACATACGCGCCTGTTGATGACCATCTACTACAACAAAATTACCCCGTCAGTGATGGCAGAAAAGATGGATGAAGCACATG
GTGAGCTGGATGCTAAATCCAAACAATCGGTACGCAACTTCCTTAAAGATGCCTCAATGGAGCAAATCCAATGCAAGATG
GTGTATCACAGTGATGACAGCATTCAGGCGGCGTTGGTTAACCGCAACCCGATTGGCTGGGAAGAGCGCTCCTGTGGGAT
GTGTCTGGTAGGCGGTAACACTGTGAAATCGGATGAAGTCAGCACCCTTGGTGGTTGCTGGAACGGTGGTGAGCTGATTA
AAGATTCAAAAGTCGCCGCAAATCGCCTTTATGCCAGCGTACCCCACGGCCCTGAAAATTGTATTCGCTGCCGTTGGTTT
ATTACCGAAGCTTATTACCTTAAGCCACTCAATGCCCACTTCAATCAACTGAGCTACAAAGCACATCAAGTCGCCAACCT
ATCTGTTGAGATTGAGGGGGAATTGGAAGCCCTCAAAGACGAACAATTCTTTTGTGAAGAGCAAGGCAAGCCGTTTATTA
AGCACGATAAGTTGCAAGCCCTACAGCGCCGCTATGAAAAACAGCAAGTAGAAGCCGATGAATACACCAAAGACTGGATT
GCGTGTTTTGAGCTTATTTATAAAATCATGCGTGTCGAAGAAGCCAGAAAGGAAGGTGATACCAAAGATAAACTGATTGC
GGTTGGCACTGAGCAAGATGTCAGTCATGCCTTGAAGTTTATCGAAACCAACTCAGAGTTGCTGCATCTATCACTACTTT
GTGATGACGCTGAATTCTACCCTGATTTGCAGGACGAACTGCGTAAAACCCCTGTTATCCAAAAGCGTTCAATGCAACTT
AGCCGTGTATTGATGAAAAAAGGCTTTGAGCCGATTTTCATGGAAATGGACGACAAACAACAGCTTATCGCTGCCAATGC
CATGCTGCGTCATATGGCAAAAATCGCTGACCCTGACGACAAGCTCGAAGGCTTCCGCAAAGTGGCGAGCTACATCGAAG
CGGGTGAATACCTGACTGATAACAATCTGTTCTCTCAGGGCATTCATGCACTGACTGATAAAGTCATTAATCTAGATGGC
ATAGCACTACCGAACTTATTGGAGGACTAA

Upstream 100 bases:

>100_bases
TCAAAGCACTCGACTGGAAAGCACTGGTTGGGCATGGTTTTGATGACATCGACCCACAGGGTTACTTCACAGGCAAGCAT
CCAAAATTGAGAGGCAAATA

Downstream 100 bases:

>100_bases
TGGAACTTGATATTGATGTCATTCTGGCTGACTTAAAAGATGGCAAAGTACCTCGCACGCAGCAAAACCTCGATAAGCTC
AACGACACGCTGAAAGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase; Integrase Family Protein; Site-Specific Recombinase Phage Integrase Family Protein

Number of amino acids: Translated: 889; Mature: 888

Protein sequence:

>889_residues
MGRTKGKKADGRTSDLTFSWMLTTLGAEWQQWQELAAEWMAEQTTGIDHKQQAMARFFESYLVECAPYAISNIDLFFQGY
NGHRCSSEQLETVVKKTQNTATIIQKGVNYPCDFIDFVIEKVFSEEDDNGNFVPLVQNPLNKIKVQGSTTETVRNPLPYR
YIQDLRQILCPLPDKTELTVIEQNLKEDEQLLPAYHYRHFKHWTWAQRQSGQGERGGDGDWFEVEPERIDKTDPDCVWRT
NEVTRKGNKITVHQIWSPVKAMVIFMKLHLPLRTYQVRMLDSGEADTWRYENGQWVVNTQHDFALGSEKRPFGKGMFRRI
HDTMTGLHSTGLYINTNKTADQNKDELERGYIIPWQNEEVLYWLEKLRNWQEKYNPISKPTDCTTLLIKHTRKKKSEKQL
ESMGEIAFLFRDASAKGEDKFKPINYNATDSFWYQLLLTLENQLAEQGNTLDNGERLKLVVDYPEGTPEWNKVATLFPLH
SLRVSLITAYTMDTQLPLPVISKLLAGHTRLLMTIYYNKITPSVMAEKMDEAHGELDAKSKQSVRNFLKDASMEQIQCKM
VYHSDDSIQAALVNRNPIGWEERSCGMCLVGGNTVKSDEVSTLGGCWNGGELIKDSKVAANRLYASVPHGPENCIRCRWF
ITEAYYLKPLNAHFNQLSYKAHQVANLSVEIEGELEALKDEQFFCEEQGKPFIKHDKLQALQRRYEKQQVEADEYTKDWI
ACFELIYKIMRVEEARKEGDTKDKLIAVGTEQDVSHALKFIETNSELLHLSLLCDDAEFYPDLQDELRKTPVIQKRSMQL
SRVLMKKGFEPIFMEMDDKQQLIAANAMLRHMAKIADPDDKLEGFRKVASYIEAGEYLTDNNLFSQGIHALTDKVINLDG
IALPNLLED

Sequences:

>Translated_889_residues
MGRTKGKKADGRTSDLTFSWMLTTLGAEWQQWQELAAEWMAEQTTGIDHKQQAMARFFESYLVECAPYAISNIDLFFQGY
NGHRCSSEQLETVVKKTQNTATIIQKGVNYPCDFIDFVIEKVFSEEDDNGNFVPLVQNPLNKIKVQGSTTETVRNPLPYR
YIQDLRQILCPLPDKTELTVIEQNLKEDEQLLPAYHYRHFKHWTWAQRQSGQGERGGDGDWFEVEPERIDKTDPDCVWRT
NEVTRKGNKITVHQIWSPVKAMVIFMKLHLPLRTYQVRMLDSGEADTWRYENGQWVVNTQHDFALGSEKRPFGKGMFRRI
HDTMTGLHSTGLYINTNKTADQNKDELERGYIIPWQNEEVLYWLEKLRNWQEKYNPISKPTDCTTLLIKHTRKKKSEKQL
ESMGEIAFLFRDASAKGEDKFKPINYNATDSFWYQLLLTLENQLAEQGNTLDNGERLKLVVDYPEGTPEWNKVATLFPLH
SLRVSLITAYTMDTQLPLPVISKLLAGHTRLLMTIYYNKITPSVMAEKMDEAHGELDAKSKQSVRNFLKDASMEQIQCKM
VYHSDDSIQAALVNRNPIGWEERSCGMCLVGGNTVKSDEVSTLGGCWNGGELIKDSKVAANRLYASVPHGPENCIRCRWF
ITEAYYLKPLNAHFNQLSYKAHQVANLSVEIEGELEALKDEQFFCEEQGKPFIKHDKLQALQRRYEKQQVEADEYTKDWI
ACFELIYKIMRVEEARKEGDTKDKLIAVGTEQDVSHALKFIETNSELLHLSLLCDDAEFYPDLQDELRKTPVIQKRSMQL
SRVLMKKGFEPIFMEMDDKQQLIAANAMLRHMAKIADPDDKLEGFRKVASYIEAGEYLTDNNLFSQGIHALTDKVINLDG
IALPNLLED
>Mature_888_residues
GRTKGKKADGRTSDLTFSWMLTTLGAEWQQWQELAAEWMAEQTTGIDHKQQAMARFFESYLVECAPYAISNIDLFFQGYN
GHRCSSEQLETVVKKTQNTATIIQKGVNYPCDFIDFVIEKVFSEEDDNGNFVPLVQNPLNKIKVQGSTTETVRNPLPYRY
IQDLRQILCPLPDKTELTVIEQNLKEDEQLLPAYHYRHFKHWTWAQRQSGQGERGGDGDWFEVEPERIDKTDPDCVWRTN
EVTRKGNKITVHQIWSPVKAMVIFMKLHLPLRTYQVRMLDSGEADTWRYENGQWVVNTQHDFALGSEKRPFGKGMFRRIH
DTMTGLHSTGLYINTNKTADQNKDELERGYIIPWQNEEVLYWLEKLRNWQEKYNPISKPTDCTTLLIKHTRKKKSEKQLE
SMGEIAFLFRDASAKGEDKFKPINYNATDSFWYQLLLTLENQLAEQGNTLDNGERLKLVVDYPEGTPEWNKVATLFPLHS
LRVSLITAYTMDTQLPLPVISKLLAGHTRLLMTIYYNKITPSVMAEKMDEAHGELDAKSKQSVRNFLKDASMEQIQCKMV
YHSDDSIQAALVNRNPIGWEERSCGMCLVGGNTVKSDEVSTLGGCWNGGELIKDSKVAANRLYASVPHGPENCIRCRWFI
TEAYYLKPLNAHFNQLSYKAHQVANLSVEIEGELEALKDEQFFCEEQGKPFIKHDKLQALQRRYEKQQVEADEYTKDWIA
CFELIYKIMRVEEARKEGDTKDKLIAVGTEQDVSHALKFIETNSELLHLSLLCDDAEFYPDLQDELRKTPVIQKRSMQLS
RVLMKKGFEPIFMEMDDKQQLIAANAMLRHMAKIADPDDKLEGFRKVASYIEAGEYLTDNNLFSQGIHALTDKVINLDGI
ALPNLLED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102516; Mature: 102384

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRTKGKKADGRTSDLTFSWMLTTLGAEWQQWQELAAEWMAEQTTGIDHKQQAMARFFES
CCCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLVECAPYAISNIDLFFQGYNGHRCSSEQLETVVKKTQNTATIIQKGVNYPCDFIDFVIE
HHHHHCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
KVFSEEDDNGNFVPLVQNPLNKIKVQGSTTETVRNPLPYRYIQDLRQILCPLPDKTELTV
HHHCCCCCCCCEEEEECCCCHHEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
IEQNLKEDEQLLPAYHYRHFKHWTWAQRQSGQGERGGDGDWFEVEPERIDKTDPDCVWRT
HHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECHHHCCCCCCCCEECC
NEVTRKGNKITVHQIWSPVKAMVIFMKLHLPLRTYQVRMLDSGEADTWRYENGQWVVNTQ
CHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCEEEEECC
HDFALGSEKRPFGKGMFRRIHDTMTGLHSTGLYINTNKTADQNKDELERGYIIPWQNEEV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHCCCEECCCCCHH
LYWLEKLRNWQEKYNPISKPTDCTTLLIKHTRKKKSEKQLESMGEIAFLFRDASAKGEDK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
FKPINYNATDSFWYQLLLTLENQLAEQGNTLDNGERLKLVVDYPEGTPEWNKVATLFPLH
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
SLRVSLITAYTMDTQLPLPVISKLLAGHTRLLMTIYYNKITPSVMAEKMDEAHGELDAKS
HHHHHHHEEEECCCCCCHHHHHHHHCCCHHEEHHHHHHHCCHHHHHHHHHHHCCCCCCHH
KQSVRNFLKDASMEQIQCKMVYHSDDSIQAALVNRNPIGWEERSCGMCLVGGNTVKSDEV
HHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCC
STLGGCWNGGELIKDSKVAANRLYASVPHGPENCIRCRWFITEAYYLKPLNAHFNQLSYK
HHCCCCCCCCCCCCCCHHHHHHHEEECCCCHHHHEEEEEEEEHHHHCCCHHHHHHHHHHH
AHQVANLSVEIEGELEALKDEQFFCEEQGKPFIKHDKLQALQRRYEKQQVEADEYTKDWI
HHHHEEEEEEECCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ACFELIYKIMRVEEARKEGDTKDKLIAVGTEQDVSHALKFIETNSELLHLSLLCDDAEFY
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCHHHC
PDLQDELRKTPVIQKRSMQLSRVLMKKGFEPIFMEMDDKQQLIAANAMLRHMAKIADPDD
CCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHH
KLEGFRKVASYIEAGEYLTDNNLFSQGIHALTDKVINLDGIALPNLLED
HHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHCC
>Mature Secondary Structure 
GRTKGKKADGRTSDLTFSWMLTTLGAEWQQWQELAAEWMAEQTTGIDHKQQAMARFFES
CCCCCCCCCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
YLVECAPYAISNIDLFFQGYNGHRCSSEQLETVVKKTQNTATIIQKGVNYPCDFIDFVIE
HHHHHCCHHHCCEEEEEECCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHH
KVFSEEDDNGNFVPLVQNPLNKIKVQGSTTETVRNPLPYRYIQDLRQILCPLPDKTELTV
HHHCCCCCCCCEEEEECCCCHHEEECCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHH
IEQNLKEDEQLLPAYHYRHFKHWTWAQRQSGQGERGGDGDWFEVEPERIDKTDPDCVWRT
HHHHHCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCEEECHHHCCCCCCCCEECC
NEVTRKGNKITVHQIWSPVKAMVIFMKLHLPLRTYQVRMLDSGEADTWRYENGQWVVNTQ
CHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCEEECCCEEEEECC
HDFALGSEKRPFGKGMFRRIHDTMTGLHSTGLYINTNKTADQNKDELERGYIIPWQNEEV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHHCCCEECCCCCHH
LYWLEKLRNWQEKYNPISKPTDCTTLLIKHTRKKKSEKQLESMGEIAFLFRDASAKGEDK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCC
FKPINYNATDSFWYQLLLTLENQLAEQGNTLDNGERLKLVVDYPEGTPEWNKVATLFPLH
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHH
SLRVSLITAYTMDTQLPLPVISKLLAGHTRLLMTIYYNKITPSVMAEKMDEAHGELDAKS
HHHHHHHEEEECCCCCCHHHHHHHHCCCHHEEHHHHHHHCCHHHHHHHHHHHCCCCCCHH
KQSVRNFLKDASMEQIQCKMVYHSDDSIQAALVNRNPIGWEERSCGMCLVGGNTVKSDEV
HHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCEEEECCCCCCCCCC
STLGGCWNGGELIKDSKVAANRLYASVPHGPENCIRCRWFITEAYYLKPLNAHFNQLSYK
HHCCCCCCCCCCCCCCHHHHHHHEEECCCCHHHHEEEEEEEEHHHHCCCHHHHHHHHHHH
AHQVANLSVEIEGELEALKDEQFFCEEQGKPFIKHDKLQALQRRYEKQQVEADEYTKDWI
HHHHEEEEEEECCHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
ACFELIYKIMRVEEARKEGDTKDKLIAVGTEQDVSHALKFIETNSELLHLSLLCDDAEFY
HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEEEEECCHHHC
PDLQDELRKTPVIQKRSMQLSRVLMKKGFEPIFMEMDDKQQLIAANAMLRHMAKIADPDD
CCHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCHH
KLEGFRKVASYIEAGEYLTDNNLFSQGIHALTDKVINLDGIALPNLLED
HHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA