Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921354

Identifier: 117921354

GI number: 117921354

Start: 3489567

End: 3489977

Strand: Direct

Name: 117921354

Synonym: Shewana3_2914

Alternate gene names: NA

Gene position: 3489567-3489977 (Clockwise)

Preceding gene: 117921353

Following gene: 117921355

Centisome position: 70.18

GC content: 44.04

Gene sequence:

>411_bases
ATGTTATCAGCATTAGTGGTTGGCTTACCTATCATATTAATCAATATGTTACTGCAATCTCTTGCCACTATGTGGTGCAT
CCGTTTCTACAATAAACGGCTACTAGACCACGATAGTTTAGTCGCAGGGGTATTAGGACTCTTCGGTATCACCAGCATAG
TAATGCTGGGTAACCTTTTACAAATCGTCGCTTGGGGCAGCTTGTTTCTCTTCCTCGGCGAGTTCAATAACCTGCATGAT
GCGATTTATCATTCTGGGGTCAACTTCGCGACCTTAGGCTATGGCGATATTGTGATGAGTGAAAAATGGAAATTATTAGG
CCCAATCGAAGCGGTAAATGGCGCCCTGATGATCGGCTTATCGGGCGCATCCATGTTGGCTGTGCTACAGCAATATGTGA
AGAAAAAATGA

Upstream 100 bases:

>100_bases
TATTTATTGGTCGCTGGTTATGGTTGGCTATGTTTTATCGCACTGGAGCAGAAATGGCCAGCAGGCCGCCCAGCATCAGA
AGCCCCCGTAGGAGAATAGA

Downstream 100 bases:

>100_bases
CCGATAAAGCCTCAATGTAAGCGCTGTCTATAGTGATCCCAAGATCCGGTGGAATGATGACCCAACACACCTACAAAAAA
GCCGCCTCAGTTATTATATA

Product: Ion transport 2 domain-containing protein

Products: NA

Alternate protein names: Ion Transport 2 Domain Protein; Transmembrane Protein; Voltage-Dependent Potassium Channel; Membrane Lipoprotein

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLLQIVAWGSLFLFLGEFNNLHD
AIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGLSGASMLAVLQQYVKKK

Sequences:

>Translated_136_residues
MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLLQIVAWGSLFLFLGEFNNLHD
AIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGLSGASMLAVLQQYVKKK
>Mature_136_residues
MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLLQIVAWGSLFLFLGEFNNLHD
AIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGLSGASMLAVLQQYVKKK

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14854; Mature: 14854

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QIVAWGSLFLFLGEFNNLHDAIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGL
HHHHHHHHHHHHHHHCHHHHHHHHCCCCEEECCCCHHHHCCCCHHHCHHHHHCCEEEEEE
SGASMLAVLQQYVKKK
CCHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSALVVGLPIILINMLLQSLATMWCIRFYNKRLLDHDSLVAGVLGLFGITSIVMLGNLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QIVAWGSLFLFLGEFNNLHDAIYHSGVNFATLGYGDIVMSEKWKLLGPIEAVNGALMIGL
HHHHHHHHHHHHHHHCHHHHHHHHCCCCEEECCCCHHHHCCCCHHHCHHHHHCCEEEEEE
SGASMLAVLQQYVKKK
CCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA