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The map label for this gene is motB [H]

Identifier: 117921338

GI number: 117921338

Start: 3466819

End: 3467739

Strand: Reverse

Name: motB [H]

Synonym: Shewana3_2897

Alternate gene names: 117921338

Gene position: 3467739-3466819 (Counterclockwise)

Preceding gene: 117921339

Following gene: 117921337

Centisome position: 69.74

GC content: 52.88

Gene sequence:

>921_bases
ATGGCTAAGTGCAACTGTCCACCGCCCGGAGCGCCGCTCTGGTTGGCAACATTTGCCGATTTGATGTCCCTCTTGATGTG
TTTCTTCGTGCTGCTGCTGTCATTCTCCGAAATGGACGTGATGAAGTTTAAGCAGATCGCAGGCTCGATGAAGTATGCCT
TCGGGGTGCAAAACAAGGTCGAAGTCAAAGACATTCCTAAGGGGACGTCTGTGATTGCATTGGAGTTTCGTCCTGGCCGT
CCCGATCCCACGCCGATTGAAATCATTAACCAACAAACCAACGAAATGACCGAACCCGTATTGGATTATCAAGCGGGCGA
GGACGATAGCGCGGGTGGTGTGCAGCAGCAAAATGGTTCGCAGCGGGGCGGTGAAGCCTCGGCGACGGCCCAAGAAACGG
CGGATGCGGTAAAAGCGGAAGCCGCAGCGGCGCAGGATAAAATCAATCAGCAAGTGAAGAAAATGGCGCAGGAACTCAAT
AACGAGATCACCGATGGGGCGATCGAAATTGAGTCACTAGGGCAGCAAATCATTATCCGTATCCGTGAGAAGGGCTCATT
TGCCTCGGGATCGGGCTTCCTGCAGCCACGATTTAAACCTGTGGTGCGCTCGGTCGGTGAATTGCTAAAAGATGTGCCGG
GGATCATCACGGTATCGGGTTACACCGATGATATGCAGATAAGCGATGAGCTCTACAGCTCGAACTGGGATCTCTCGAGC
AAACGCGCAGTGGCGGTGGCCGATGTGCTGCTGCAAGTGAAGGGCTTCGATCCTAAGCGGATGAAAGTGGTCGGTATGGC
GTCGAATAATCCCATCGTGCCTAATGACTCACCTGAAAACCGCGCGCGAAACCGCCGCGTTGAGATTGCCATTGAACAGG
GTAAAGCAAAAGAATCCGAAGAAATTCAAGTGGGTAAATAG

Upstream 100 bases:

>100_bases
GATTCAAGATGGTCAAAACCCGCGGGTGATTGAAGGTTTCTTGAAGAATTATCTTGCTGAAAAACAGCGGAAAATCGATA
CAACGGACGGAGAGTAGCCC

Downstream 100 bases:

>100_bases
CTTTTAATCCAAATCTGTGACTCGATAAAAACGCCGTGACTTGCTCACGGCTTTTTTATTTGTGATTTTTTGACTATAAG
TTCAACTGTGCATAAGCGCA

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MAKCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIALEFRPGR
PDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQNGSQRGGEASATAQETADAVKAEAAAAQDKINQQVKKMAQELN
NEITDGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDLSS
KRAVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESEEIQVGK

Sequences:

>Translated_306_residues
MAKCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIALEFRPGR
PDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQNGSQRGGEASATAQETADAVKAEAAAAQDKINQQVKKMAQELN
NEITDGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDLSS
KRAVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESEEIQVGK
>Mature_305_residues
AKCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIALEFRPGRP
DPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQNGSQRGGEASATAQETADAVKAEAAAAQDKINQQVKKMAQELNN
EITDGAIEIESLGQQIIIRIREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDLSSK
RAVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESEEIQVGK

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI48994946, Length=136, Percent_Identity=31.6176470588235, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 33323; Mature: 33192

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
EVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQNGS
CCCCCCCCCEEEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QRGGEASATAQETADAVKAEAAAAQDKINQQVKKMAQELNNEITDGAIEIESLGQQIIIR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHCHHHEEH
IREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDLSS
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCCCC
KRAVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESE
CHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCC
EIQVGK
CCCCCC
>Mature Secondary Structure 
AKCNCPPPGAPLWLATFADLMSLLMCFFVLLLSFSEMDVMKFKQIAGSMKYAFGVQNKV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC
EVKDIPKGTSVIALEFRPGRPDPTPIEIINQQTNEMTEPVLDYQAGEDDSAGGVQQQNGS
CCCCCCCCCEEEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
QRGGEASATAQETADAVKAEAAAAQDKINQQVKKMAQELNNEITDGAIEIESLGQQIIIR
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHCHHHEEH
IREKGSFASGSGFLQPRFKPVVRSVGELLKDVPGIITVSGYTDDMQISDELYSSNWDLSS
HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHCCCCCCCC
KRAVAVADVLLQVKGFDPKRMKVVGMASNNPIVPNDSPENRARNRRVEIAIEQGKAKESE
CHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHCCEEEEEEECCCCCCCC
EIQVGK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]