| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921313
Identifier: 117921313
GI number: 117921313
Start: 3434896
End: 3435435
Strand: Reverse
Name: 117921313
Synonym: Shewana3_2872
Alternate gene names: NA
Gene position: 3435435-3434896 (Counterclockwise)
Preceding gene: 117921314
Following gene: 117921311
Centisome position: 69.09
GC content: 46.85
Gene sequence:
>540_bases ATGGCTAAGTTCAGAGTAGCAAGTGTCTTATTATTGAGTGCAGCCGCACTGCAGGTGAATGCGTCAGAATTTAATCTTGG GTTAAACAACGATGTGGTTTCTACCGAGTTAGAGCTGCAAGTGAATAAAGATGTCAATGCAGTATTAGGATATATTTATT CAGACGACAGTGGTCATATTGCCCAAGGCGCAATGCACATGACCCATGATGTTGGCGTACACCACTTCGAAGTCGGTGCT AAGTTAAGCCAGTTATGGGCAGATGATGCGCCAAACGGCAGTGCCGTGTCCGTGGGCGGTCGTTATGCCTTGGCGTTAGG GCCAAATATCTCTTTGCATGCCGCCGCTTACTATGCGCCATCGGTATTGTCTTTCGGTAATGTCGATGGTCAATACGAGT TAGATTCAAAGGTGCAGTACCGCGTGAACCCTAATATGGCGTTCTATGTGGGTTACCGTAAGATTGCCTTCGAATATGAT CACGCCCGTGACTTTACCTTCGAAGATGGCGTTTATATCGGCGGTAAATTCCGCTTCTAA
Upstream 100 bases:
>100_bases AATTCAAAAATCTTCGCGACTCTCAACTAAATATGCAGATTTTCTTTTTTTATTCGGTATGATCCGCGCCATTACCCACA GTCATTATTGAGGTGTTTTT
Downstream 100 bases:
>100_bases TCTCGCCTTTATTGAGTGGCCCGTGGCCACTTTGATTTCAAAGCCGGCCAAGGTTAACTTCGCCGGCTTTTCCATTTGGC TTTCAGTTCACTGTAGCTTG
Product: YfaZ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQVNKDVNAVLGYIYSDDSGHIAQGAMHMTHDVGVHHFEVGA KLSQLWADDAPNGSAVSVGGRYALALGPNISLHAAAYYAPSVLSFGNVDGQYELDSKVQYRVNPNMAFYVGYRKIAFEYD HARDFTFEDGVYIGGKFRF
Sequences:
>Translated_179_residues MAKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQVNKDVNAVLGYIYSDDSGHIAQGAMHMTHDVGVHHFEVGA KLSQLWADDAPNGSAVSVGGRYALALGPNISLHAAAYYAPSVLSFGNVDGQYELDSKVQYRVNPNMAFYVGYRKIAFEYD HARDFTFEDGVYIGGKFRF >Mature_178_residues AKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQVNKDVNAVLGYIYSDDSGHIAQGAMHMTHDVGVHHFEVGAK LSQLWADDAPNGSAVSVGGRYALALGPNISLHAAAYYAPSVLSFGNVDGQYELDSKVQYRVNPNMAFYVGYRKIAFEYDH ARDFTFEDGVYIGGKFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19531; Mature: 19400
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQVNKDVNAVLGYIYSDDSGHI CCCHHHHHHHHHHHHEEEEEHHHEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCE AQGAMHMTHDVGVHHFEVGAKLSQLWADDAPNGSAVSVGGRYALALGPNISLHAAAYYAP ECCEEEEHHCCCCEEEECCHHHHHHHCCCCCCCCEEEECCEEEEEECCCCEEEEEEEECC SVLSFGNVDGQYELDSKVQYRVNPNMAFYVGYRKIAFEYDHARDFTFEDGVYIGGKFRF CEEECCCCCCEEEECCEEEEEECCCEEEEEEEEEEEEEECCCCCCEECCCEEEEEEECC >Mature Secondary Structure AKFRVASVLLLSAAALQVNASEFNLGLNNDVVSTELELQVNKDVNAVLGYIYSDDSGHI CCHHHHHHHHHHHHEEEEEHHHEECCCCCCEEEEEEEEEECCCCCCEEEEEEECCCCCE AQGAMHMTHDVGVHHFEVGAKLSQLWADDAPNGSAVSVGGRYALALGPNISLHAAAYYAP ECCEEEEHHCCCCEEEECCHHHHHHHCCCCCCCCEEEECCEEEEEECCCCEEEEEEEECC SVLSFGNVDGQYELDSKVQYRVNPNMAFYVGYRKIAFEYDHARDFTFEDGVYIGGKFRF CEEECCCCCCEEEECCEEEEEECCCEEEEEEEEEEEEEECCCCCCEECCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA