| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is sam [H]
Identifier: 117921312
GI number: 117921312
Start: 3433991
End: 3434842
Strand: Direct
Name: sam [H]
Synonym: Shewana3_2871
Alternate gene names: 117921312
Gene position: 3433991-3434842 (Clockwise)
Preceding gene: 117921310
Following gene: 117921316
Centisome position: 69.06
GC content: 46.95
Gene sequence:
>852_bases ATGGCACCATTATTGATGATTTTAGCTGCACAATTATTGATTGCCAGCGGCAACCTATTGGTTAAGTTGCTTGAAACCAA TGCGCCCGTATTTCAACTTGTGCTTTATCGCCAATTATTTGCCACGCTTTTGGTGCTTCCCTTTGTCTGGCGCCTACAGG GGAACCTTAAGTTAAGCCCCTTCTACAAAGTGCACTTAAGCCGAGCGCTGTTAATCGGCTTAGGCAATGCCATCTTTATG CTGGCGGTATTACACTTACCACTCGCAACCGTGACGGCGGTGATCTATACCTCGCCATTGTTACTGTTGCTGATGTCCGC CTTCTTTTTAAATGAGCGTATTGGTTATCGTCGCACCGTTGCGGGGATTATTGGTTTTACGGGCATTTTGCTGATAAGTC AGCCGACGGAATTTAACCTCTATATCGGTCTAGCCTTTTTTGGTGCCATGACTTCGGCAACAAACAGCCTGATTTTGAAG GCATATTCAACCCATGAGCATCCCTTTTCAACACTCTTTTGGTCTAATGCCTTTGCGATGGTTTTTCTGATACCGGCAAC TTGGTACGAGGGTGCCGACTTTAGCCTGCCCGTTGCCCAAGTTGGCTTAACCTTAGGGCTGTTTTATATTGGTATGACCT ACCTCATCATCCACGCCTATCGGCGCGCCGATGCCAGCCAAATGGCCCCAGTGGAATACACAGGCCTTATTTTTGCCGCA TTGTTTGGTTGGTGGTTTTTGGATGAGCACTTAAGCATTGTGGTGTGTATTGGCATAGGACTGGTGATTTTTTCCTCCAT CCTGCCAAGCTACAGTGAACTGAAAGCCAAATGGAAAAGCCGGCGAAGTTAA
Upstream 100 bases:
>100_bases ACTAAATTAGTCGGCAATTGGGTGCCTTATGATGATATTTTAGTCGTTAACTTAAGGGACAACACCTTAGCCTCAATATC AGACGTTCACTTGGATACCT
Downstream 100 bases:
>100_bases CCTTGGCCGGCTTTGAAATCAAAGTGGCCACGGGCCACTCAATAAAGGCGAGATTAGAAGCGGAATTTACCGCCGATATA AACGCCATCTTCGAAGGTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MAPLLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSPFYKVHLSRALLIGLGNAIFM LAVLHLPLATVTAVIYTSPLLLLLMSAFFLNERIGYRRTVAGIIGFTGILLISQPTEFNLYIGLAFFGAMTSATNSLILK AYSTHEHPFSTLFWSNAFAMVFLIPATWYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA LFGWWFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS
Sequences:
>Translated_283_residues MAPLLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSPFYKVHLSRALLIGLGNAIFM LAVLHLPLATVTAVIYTSPLLLLLMSAFFLNERIGYRRTVAGIIGFTGILLISQPTEFNLYIGLAFFGAMTSATNSLILK AYSTHEHPFSTLFWSNAFAMVFLIPATWYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA LFGWWFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS >Mature_282_residues APLLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSPFYKVHLSRALLIGLGNAIFML AVLHLPLATVTAVIYTSPLLLLLMSAFFLNERIGYRRTVAGIIGFTGILLISQPTEFNLYIGLAFFGAMTSATNSLILKA YSTHEHPFSTLFWSNAFAMVFLIPATWYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAAL FGWWFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 31479; Mature: 31348
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPLLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP CCHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC FYKVHLSRALLIGLGNAIFMLAVLHLPLATVTAVIYTSPLLLLLMSAFFLNERIGYRRTV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AGIIGFTGILLISQPTEFNLYIGLAFFGAMTSATNSLILKAYSTHEHPFSTLFWSNAFAM HHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHEE VFLIPATWYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA EEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHH LFGWWFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure APLLMILAAQLLIASGNLLVKLLETNAPVFQLVLYRQLFATLLVLPFVWRLQGNLKLSP CHHHHHHHHHHHHHCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECC FYKVHLSRALLIGLGNAIFMLAVLHLPLATVTAVIYTSPLLLLLMSAFFLNERIGYRRTV HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH AGIIGFTGILLISQPTEFNLYIGLAFFGAMTSATNSLILKAYSTHEHPFSTLFWSNAFAM HHHHHHHHHEEEECCCCEEEEEHHHHHHHHHHCCHHHEEEEECCCCCCHHHHHHHHHHEE VFLIPATWYEGADFSLPVAQVGLTLGLFYIGMTYLIIHAYRRADASQMAPVEYTGLIFAA EEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHH LFGWWFLDEHLSIVVCIGIGLVIFSSILPSYSELKAKWKSRRS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA