Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921295

Identifier: 117921295

GI number: 117921295

Start: 3415127

End: 3415369

Strand: Direct

Name: 117921295

Synonym: Shewana3_2854

Alternate gene names: NA

Gene position: 3415127-3415369 (Clockwise)

Preceding gene: 117921292

Following gene: 117921301

Centisome position: 68.68

GC content: 46.5

Gene sequence:

>243_bases
ATGACCAATGCATCGACTAGCCCTTTTGCGGTGTTAAACCAAAGCACTGCAAACTCGTTTAATGAACAGAAAAACCTGAT
TAAACGGGTCTTTAAAGGCAAGCCAGTGCAATGTCCAAGCTGCAATCAAACCCTCAAAGTCATCTTGCCGGAGACGGCTA
AAGCCGATCAAGCCGCAGGCATTTTCTGCCCTAAGGGCTGTACCGATATAGAGCTGGATATAGAAGCTGTAGCGGGTATC
TAA

Upstream 100 bases:

>100_bases
TATGATTTAGACTTTTCATTCCCGTTCCCAATCAGGCTATAATTCTTTCCGCTAAATACATAGCCCACATATAACCGTAC
CTTTAAGGATCTGATTGCCT

Downstream 100 bases:

>100_bases
CGTAATTGTCCGTGTAAATAATGGCGGTAATATCCCACCAGATTACTGCCAATAAACAGCAGCTCCATCAATACCGCCAC
GGGCGAGCCAACTAAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MTNASTSPFAVLNQSTANSFNEQKNLIKRVFKGKPVQCPSCNQTLKVILPETAKADQAAGIFCPKGCTDIELDIEAVAGI

Sequences:

>Translated_80_residues
MTNASTSPFAVLNQSTANSFNEQKNLIKRVFKGKPVQCPSCNQTLKVILPETAKADQAAGIFCPKGCTDIELDIEAVAGI
>Mature_79_residues
TNASTSPFAVLNQSTANSFNEQKNLIKRVFKGKPVQCPSCNQTLKVILPETAKADQAAGIFCPKGCTDIELDIEAVAGI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8527; Mature: 8396

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNASTSPFAVLNQSTANSFNEQKNLIKRVFKGKPVQCPSCNQTLKVILPETAKADQAAG
CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC
IFCPKGCTDIELDIEAVAGI
EECCCCCCCEEEEHEEECCC
>Mature Secondary Structure 
TNASTSPFAVLNQSTANSFNEQKNLIKRVFKGKPVQCPSCNQTLKVILPETAKADQAAG
CCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCC
IFCPKGCTDIELDIEAVAGI
EECCCCCCCEEEEHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA