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The map label for this gene is osmY [C]

Identifier: 117921292

GI number: 117921292

Start: 3412814

End: 3413362

Strand: Direct

Name: osmY [C]

Synonym: Shewana3_2851

Alternate gene names: 117921292

Gene position: 3412814-3413362 (Clockwise)

Preceding gene: 117921291

Following gene: 117921295

Centisome position: 68.64

GC content: 47.18

Gene sequence:

>549_bases
ATGAAAAACACGACAACTTTAGCTTTAACCACCTTACTTGTCGGTTCTATCAGTTTAAATGTGGCCGCCGCACAGGATTG
GAAAGACGATGCCAAAGATGCTTGGCTAGATGGCAAGGCCGAAACGACTTTGTTGCTCAATACTAACCTCAACTCCTTTG
ACATTATGACCGACGTGAAAAACGGCCATGTCACCTTAACCGGTCAAGTGGAGAGCAGTGTCGATAAGGCGCTCGCCGCT
GAGCTCATCAAAAGCTTAGATGGCGTAAAAGGGGTCGATAACAAGTTAACCGTGATGAAAGAAGACGAAGGCACCAATGA
GGTGGTGAAGACCTTAACCGACTCTAAGGTCGCAACGGTCGTAAAAACCCGTCTGTTGTTCTCGACCGACGTATCGGGCA
CCCAAATTAATGTCGATGTTGCCGATGGCGTAGTGACCTTACAGGGTGAAGTGGCTAGCGACGCCGAGCGTCAATTAGCC
CTGACCATTGCTAAAAATACCGATGATGTGAAAAAGGTCGTCGATAAAATCAAAGTCAAAACCTCATAA

Upstream 100 bases:

>100_bases
TTAGTCACCACCCAATTAATCATATTTAAAATCAGTAGGATAAAAACATTGGCACGATTCACGCTTTAGTTCCTTCGAGA
TAACAACGGAGGATATCATT

Downstream 100 bases:

>100_bases
TGGTCCCGACCATTCAGCCCTTGCTAATTCAGCCCTTGCTAATTCAGCTCTTGATAACTCAGCTGTTGGTAACTCAGCTG
TTGGTATTAGTCACTCGGGC

Product: transport-associated

Products: NA

Alternate protein names: Histidine Kinase; Periplasmic Or Secreted Lipoprotein

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKNTTTLALTTLLVGSISLNVAAAQDWKDDAKDAWLDGKAETTLLLNTNLNSFDIMTDVKNGHVTLTGQVESSVDKALAA
ELIKSLDGVKGVDNKLTVMKEDEGTNEVVKTLTDSKVATVVKTRLLFSTDVSGTQINVDVADGVVTLQGEVASDAERQLA
LTIAKNTDDVKKVVDKIKVKTS

Sequences:

>Translated_182_residues
MKNTTTLALTTLLVGSISLNVAAAQDWKDDAKDAWLDGKAETTLLLNTNLNSFDIMTDVKNGHVTLTGQVESSVDKALAA
ELIKSLDGVKGVDNKLTVMKEDEGTNEVVKTLTDSKVATVVKTRLLFSTDVSGTQINVDVADGVVTLQGEVASDAERQLA
LTIAKNTDDVKKVVDKIKVKTS
>Mature_182_residues
MKNTTTLALTTLLVGSISLNVAAAQDWKDDAKDAWLDGKAETTLLLNTNLNSFDIMTDVKNGHVTLTGQVESSVDKALAA
ELIKSLDGVKGVDNKLTVMKEDEGTNEVVKTLTDSKVATVVKTRLLFSTDVSGTQINVDVADGVVTLQGEVASDAERQLA
LTIAKNTDDVKKVVDKIKVKTS

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790836, Length=148, Percent_Identity=33.7837837837838, Blast_Score=60, Evalue=6e-11,

Paralogues:

None

Copy number: 2960 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 780 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 160 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 80 Molecules/Cell In: Stati

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19390; Mature: 19390

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNTTTLALTTLLVGSISLNVAAAQDWKDDAKDAWLDGKAETTLLLNTNLNSFDIMTDVK
CCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHCCCCCCCCEEEEEECCCCCEEEEEECC
NGHVTLTGQVESSVDKALAAELIKSLDGVKGVDNKLTVMKEDEGTNEVVKTLTDSKVATV
CCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHH
VKTRLLFSTDVSGTQINVDVADGVVTLQGEVASDAERQLALTIAKNTDDVKKVVDKIKVK
HHHHHHEECCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCC
TS
CC
>Mature Secondary Structure
MKNTTTLALTTLLVGSISLNVAAAQDWKDDAKDAWLDGKAETTLLLNTNLNSFDIMTDVK
CCCCHHHHHHHHHHHHHEEEEEECCCCCCCCHHCCCCCCCCEEEEEECCCCCEEEEEECC
NGHVTLTGQVESSVDKALAAELIKSLDGVKGVDNKLTVMKEDEGTNEVVKTLTDSKVATV
CCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHCCCHHHHH
VKTRLLFSTDVSGTQINVDVADGVVTLQGEVASDAERQLALTIAKNTDDVKKVVDKIKVK
HHHHHHEECCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCHHHHHHHHHHCCC
TS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA