Click here to switch to the map view.

The map label for this gene is 117921278

Identifier: 117921278

GI number: 117921278

Start: 3383307

End: 3383828

Strand: Reverse

Name: 117921278

Synonym: Shewana3_2837

Alternate gene names: NA

Gene position: 3383828-3383307 (Counterclockwise)

Preceding gene: 117921279

Following gene: 117921277

Centisome position: 68.05

GC content: 51.92

Gene sequence:

>522_bases
ATGAAATTCAAATGCCTTTTATCGACCACCACTTTGCTACTGCTCGGTGGCTGTGGTTACTTTGGTGGCGATGAAAAACA
GCAATTAGAGCAGGCATGGCTTGCTCAAGATCCCCAACTACAACAAGTGGTTGAGCAAATCCGCAGCCGCGGGCTCGATG
TGGTCGCCCAAAGTGCGGCGGCGGGCACTGTGTCTGCCTGTGTGGCCGAAAAGCTCAGCCAAGATCCCCTAGGTAAATTA
GTGAGTGTCGAAGGCGCCTTAGTGGAGTCAGCCAAGGTGGCGGAATTGCTTGGCGATTTACAGAAGGTGATGGAACAAGA
GGTGAGTTTCGATCAAGTCGCAAGCCTGTTACAAAAGGGCGCGGATGCGGCGGCCTATGCCAAAAGCTTGATCGAACAGC
AGGGCGTCGAGCAAGCCATGCAAAGCCTTAAGCAAATGGCACTCGCCAGTGAACAATTTGCTCAGCAGGATTTAGGCGCG
CATTTCCAGCAATTATTGCTCGAGTGCAAATCTGCGAATTAA

Upstream 100 bases:

>100_bases
CCCTTCACTGACTTTGTTATTCCTCCGTTCATATTTCATTTTGGATTAAACCTAGCTCGCTATAGTCACGCCAGAGAACT
CACTGACAAGGTTGTTAATC

Downstream 100 bases:

>100_bases
CTGAATAAACGCTGTATTAGGGCTGCTTATCGGTGCAGCATTAGCAACATAAGGAAATACCATGTTTAAAAAACTGCTGG
CCTCCGTCGGTATCGGTGGT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKFKCLLSTTTLLLLGGCGYFGGDEKQQLEQAWLAQDPQLQQVVEQIRSRGLDVVAQSAAAGTVSACVAEKLSQDPLGKL
VSVEGALVESAKVAELLGDLQKVMEQEVSFDQVASLLQKGADAAAYAKSLIEQQGVEQAMQSLKQMALASEQFAQQDLGA
HFQQLLLECKSAN

Sequences:

>Translated_173_residues
MKFKCLLSTTTLLLLGGCGYFGGDEKQQLEQAWLAQDPQLQQVVEQIRSRGLDVVAQSAAAGTVSACVAEKLSQDPLGKL
VSVEGALVESAKVAELLGDLQKVMEQEVSFDQVASLLQKGADAAAYAKSLIEQQGVEQAMQSLKQMALASEQFAQQDLGA
HFQQLLLECKSAN
>Mature_173_residues
MKFKCLLSTTTLLLLGGCGYFGGDEKQQLEQAWLAQDPQLQQVVEQIRSRGLDVVAQSAAAGTVSACVAEKLSQDPLGKL
VSVEGALVESAKVAELLGDLQKVMEQEVSFDQVASLLQKGADAAAYAKSLIEQQGVEQAMQSLKQMALASEQFAQQDLGA
HFQQLLLECKSAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18515; Mature: 18515

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKCLLSTTTLLLLGGCGYFGGDEKQQLEQAWLAQDPQLQQVVEQIRSRGLDVVAQSAA
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH
AGTVSACVAEKLSQDPLGKLVSVEGALVESAKVAELLGDLQKVMEQEVSFDQVASLLQKG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
ADAAAYAKSLIEQQGVEQAMQSLKQMALASEQFAQQDLGAHFQQLLLECKSAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFKCLLSTTTLLLLGGCGYFGGDEKQQLEQAWLAQDPQLQQVVEQIRSRGLDVVAQSAA
CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHH
AGTVSACVAEKLSQDPLGKLVSVEGALVESAKVAELLGDLQKVMEQEVSFDQVASLLQKG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
ADAAAYAKSLIEQQGVEQAMQSLKQMALASEQFAQQDLGAHFQQLLLECKSAN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA