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The map label for this gene is spo0M [H]

Identifier: 117921277

GI number: 117921277

Start: 3382505

End: 3383245

Strand: Reverse

Name: spo0M [H]

Synonym: Shewana3_2836

Alternate gene names: 117921277

Gene position: 3383245-3382505 (Counterclockwise)

Preceding gene: 117921278

Following gene: 117921275

Centisome position: 68.04

GC content: 49.66

Gene sequence:

>741_bases
ATGTTTAAAAAACTGCTGGCCTCCGTCGGTATCGGTGGTGCGACGGTCGATACCCAATTAATTGATAATCGACTGCTGCC
AGGTCAAATCTTTCATGCCACTATCGTCGTTAAAGGCGGTAATGTGCCGCAGCAGATCTCCGGCCTCGACTTAGCCCTAA
TGACTAAGGTGAAAGTGAGCAGCGATAACGGCGACTATTTTAAGAACCATCGCTTGGCGAGCTGGCGCTTAACTGAGTCC
TTTGAAATTCAAGCGGGTGAAATTCGCGAGATCCCGTTTTCAGGTAAATTGCACCCCGAAACCCCTTTTACTCAGCTCCC
AGTGCGCAATAATCAATCCCAAGTATGGCTACAAACGGGAGTGGACATAGATACCGCGCTCGACCCTAGCGATATCGATG
CGCTGGTCATTATGCCAACGGCGATTGCCGAGCATGTGTTAAAGGCGATGGATGCCCTTGGTTTTGTGTTGGTGAAAGCC
GATGTGGAGCAAGGTTTCCTCAATACGCGCGCCTTTCGTTCCACTTCGGGTTGTTACCAAGAGCTAGAGTTTAAGCCGCG
CAATATGGGCTTTAATCGTTTGCGTGAGATAGAGGTTTCTCTGGTGTGCGATGCCGAGCAAACCCATGTGTTGCTTGAGC
TTGACCGCGCATTCCGTGGCGATGGTTACTTGTATTTCAGCCTGCCAAACAATGCCACGTTGAGCCAAGTACAAGAGATT
TTTAGGGCGAATTTGGCTTAA

Upstream 100 bases:

>100_bases
TTCCAGCAATTATTGCTCGAGTGCAAATCTGCGAATTAACTGAATAAACGCTGTATTAGGGCTGCTTATCGGTGCAGCAT
TAGCAACATAAGGAAATACC

Downstream 100 bases:

>100_bases
GTGCGGGGACAGTTTGTGTTGTGAGCTTGGTAGAATAGCTTACAACAGACAATAAAAAAGCCCTGATTACTCAGGGCTTT
TTGCTACAAGTTGATTACTG

Product: SpoOM family protein

Products: NA

Alternate protein names: Stage 0 sporulation protein M [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MFKKLLASVGIGGATVDTQLIDNRLLPGQIFHATIVVKGGNVPQQISGLDLALMTKVKVSSDNGDYFKNHRLASWRLTES
FEIQAGEIREIPFSGKLHPETPFTQLPVRNNQSQVWLQTGVDIDTALDPSDIDALVIMPTAIAEHVLKAMDALGFVLVKA
DVEQGFLNTRAFRSTSGCYQELEFKPRNMGFNRLREIEVSLVCDAEQTHVLLELDRAFRGDGYLYFSLPNNATLSQVQEI
FRANLA

Sequences:

>Translated_246_residues
MFKKLLASVGIGGATVDTQLIDNRLLPGQIFHATIVVKGGNVPQQISGLDLALMTKVKVSSDNGDYFKNHRLASWRLTES
FEIQAGEIREIPFSGKLHPETPFTQLPVRNNQSQVWLQTGVDIDTALDPSDIDALVIMPTAIAEHVLKAMDALGFVLVKA
DVEQGFLNTRAFRSTSGCYQELEFKPRNMGFNRLREIEVSLVCDAEQTHVLLELDRAFRGDGYLYFSLPNNATLSQVQEI
FRANLA
>Mature_246_residues
MFKKLLASVGIGGATVDTQLIDNRLLPGQIFHATIVVKGGNVPQQISGLDLALMTKVKVSSDNGDYFKNHRLASWRLTES
FEIQAGEIREIPFSGKLHPETPFTQLPVRNNQSQVWLQTGVDIDTALDPSDIDALVIMPTAIAEHVLKAMDALGFVLVKA
DVEQGFLNTRAFRSTSGCYQELEFKPRNMGFNRLREIEVSLVCDAEQTHVLLELDRAFRGDGYLYFSLPNNATLSQVQEI
FRANLA

Specific function: Controls the expression of spo0A and is required to pass the morphological stage 0 of sporulation [H]

COG id: COG4326

COG function: function code R; Sporulation control protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the spo0M family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014756
- InterPro:   IPR009776 [H]

Pfam domain/function: PF07070 Spo0M [H]

EC number: NA

Molecular weight: Translated: 27337; Mature: 27337

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKKLLASVGIGGATVDTQLIDNRLLPGQIFHATIVVKGGNVPQQISGLDLALMTKVKVS
CHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEEEEEEECCCCCHHHCCCCEEEEEEEEEE
SDNGDYFKNHRLASWRLTESFEIQAGEIREIPFSGKLHPETPFTQLPVRNNQSQVWLQTG
CCCCCHHHCCCEEEEEECCCEEECCCCEEECCCCCCCCCCCCCEECCCCCCCCEEEEEEC
VDIDTALDPSDIDALVIMPTAIAEHVLKAMDALGFVLVKADVEQGFLNTRAFRSTSGCYQ
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEECHHHCHHHHHHHCCCCCHHH
ELEFKPRNMGFNRLREIEVSLVCDAEQTHVLLELDRAFRGDGYLYFSLPNNATLSQVQEI
HHCCCCCCCCHHHHEEEEEEEEECCCCCEEEEEECHHHCCCCEEEEECCCCCCHHHHHHH
FRANLA
HHHCCC
>Mature Secondary Structure
MFKKLLASVGIGGATVDTQLIDNRLLPGQIFHATIVVKGGNVPQQISGLDLALMTKVKVS
CHHHHHHHHCCCCCEEHHHHHCCCCCCCEEEEEEEEEECCCCCHHHCCCCEEEEEEEEEE
SDNGDYFKNHRLASWRLTESFEIQAGEIREIPFSGKLHPETPFTQLPVRNNQSQVWLQTG
CCCCCHHHCCCEEEEEECCCEEECCCCEEECCCCCCCCCCCCCEECCCCCCCCEEEEEEC
VDIDTALDPSDIDALVIMPTAIAEHVLKAMDALGFVLVKADVEQGFLNTRAFRSTSGCYQ
CCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHEEEEEEECHHHCHHHHHHHCCCCCHHH
ELEFKPRNMGFNRLREIEVSLVCDAEQTHVLLELDRAFRGDGYLYFSLPNNATLSQVQEI
HHCCCCCCCCHHHHEEEEEEEEECCCCCEEEEEECHHHCCCCEEEEECCCCCCHHHHHHH
FRANLA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9795118; 9202460; 9384377 [H]