| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921267
Identifier: 117921267
GI number: 117921267
Start: 3374613
End: 3375626
Strand: Direct
Name: 117921267
Synonym: Shewana3_2826
Alternate gene names: NA
Gene position: 3374613-3375626 (Clockwise)
Preceding gene: 117921260
Following gene: 117921268
Centisome position: 67.87
GC content: 47.04
Gene sequence:
>1014_bases ATGACTGAAATTACCACGCTTAGCCAATTTTTAACGACAGCCAAAACCCAATTCCAAGTCTATGAATTAGGACGAAGAGT ACAGCACATCGATATGCTGGCCTTCCATCAAATCGAATCATTAGTCACGCCCTACCCTTACCCTATTCAAGGGCATGCCC AATTTGCCATTGTGTTTTGGAACGAGAGCCAACAGCATTTTATTTGGTTCCTAAAGCTACCATTAGACGAACAAGGACTG CTCTCGCCGGCGCCGCGCTCACAGTTTATTGAAATGGTATTAACGGCACTGGGGCAAGATCCGACTCAGCCATTAACCGA TGAACAGCAGGACCGCCTCGCTAACAATCCGTTTAGCTTTAAGCCCAGCCAAGAAAAACTGGCGGTATTTAACGCCTTAG TACGTAAACAATTAGGGTTAAGTGCTTCAATTCAATATGAGTTTGCGGTGCAATATCTCTCGGGACAAATTGCACCGAGT GAATGGCAGCATATTGGCCTGCAAGGTTTGAGCGACGTGTGTGTTCGCCTTGGTGAGTTAGATCACGAGCAGCATATCCT CGCCAGTTTTGACAATAGTGCGATTGAAGTACAAATTGCCCTGTGCCAATGCCTCGAACATCTGCATTTAACTGAAGCGC TTGCGAATAAGCTTTACGATAAGTTTGTGACGGCTTCTCCCGAGTACCAAGCCTATTACTTGCGCGCACTCGCCTCTCAT ACCGAATTGAGTCAGCAAGCCCTCGCCCATCTTCAACAAACCGAGCGCTTAGAGGCCAATGAACTCATCAGCATCGCGGG CCGAAACTGGACGGTATTAAAGCAAGAGCTGAGTCGCAGTATTTACCTCGAAGCACTGGCGCGACAACCCCAAGCCTTTT TTAATCAGATCTTTGCTGATATTGTGGCGATTCCCAGTTTGCGTAACCACTTATTGGGTGAGTTAAGAAACCCCAATCGG AGTGTTCAACTATCACAGGCCATTGGCGGCTTGTTTAAGGCTACAAGTAAATGA
Upstream 100 bases:
>100_bases CGACTGAGGCGATAAAAGTGTGGCAATCATACCATCGCGCACAACTTCCCCCTATAATGTCGCCAATTTATTGAGCCTTT TTGATTGATATGACAGCCAA
Downstream 100 bases:
>100_bases TGTCAGATCTGCTGTTAATTATTGCGCTCGTTGTGGTTGCGGCCTTTTTTTGGCAATTACGTCAAATGGCTGAATTGAGC CGTATTTTTGCTGAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MTEITTLSQFLTTAKTQFQVYELGRRVQHIDMLAFHQIESLVTPYPYPIQGHAQFAIVFWNESQQHFIWFLKLPLDEQGL LSPAPRSQFIEMVLTALGQDPTQPLTDEQQDRLANNPFSFKPSQEKLAVFNALVRKQLGLSASIQYEFAVQYLSGQIAPS EWQHIGLQGLSDVCVRLGELDHEQHILASFDNSAIEVQIALCQCLEHLHLTEALANKLYDKFVTASPEYQAYYLRALASH TELSQQALAHLQQTERLEANELISIAGRNWTVLKQELSRSIYLEALARQPQAFFNQIFADIVAIPSLRNHLLGELRNPNR SVQLSQAIGGLFKATSK
Sequences:
>Translated_337_residues MTEITTLSQFLTTAKTQFQVYELGRRVQHIDMLAFHQIESLVTPYPYPIQGHAQFAIVFWNESQQHFIWFLKLPLDEQGL LSPAPRSQFIEMVLTALGQDPTQPLTDEQQDRLANNPFSFKPSQEKLAVFNALVRKQLGLSASIQYEFAVQYLSGQIAPS EWQHIGLQGLSDVCVRLGELDHEQHILASFDNSAIEVQIALCQCLEHLHLTEALANKLYDKFVTASPEYQAYYLRALASH TELSQQALAHLQQTERLEANELISIAGRNWTVLKQELSRSIYLEALARQPQAFFNQIFADIVAIPSLRNHLLGELRNPNR SVQLSQAIGGLFKATSK >Mature_336_residues TEITTLSQFLTTAKTQFQVYELGRRVQHIDMLAFHQIESLVTPYPYPIQGHAQFAIVFWNESQQHFIWFLKLPLDEQGLL SPAPRSQFIEMVLTALGQDPTQPLTDEQQDRLANNPFSFKPSQEKLAVFNALVRKQLGLSASIQYEFAVQYLSGQIAPSE WQHIGLQGLSDVCVRLGELDHEQHILASFDNSAIEVQIALCQCLEHLHLTEALANKLYDKFVTASPEYQAYYLRALASHT ELSQQALAHLQQTERLEANELISIAGRNWTVLKQELSRSIYLEALARQPQAFFNQIFADIVAIPSLRNHLLGELRNPNRS VQLSQAIGGLFKATSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38213; Mature: 38082
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEITTLSQFLTTAKTQFQVYELGRRVQHIDMLAFHQIESLVTPYPYPIQGHAQFAIVFW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE NESQQHFIWFLKLPLDEQGLLSPAPRSQFIEMVLTALGQDPTQPLTDEQQDRLANNPFSF CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC KPSQEKLAVFNALVRKQLGLSASIQYEFAVQYLSGQIAPSEWQHIGLQGLSDVCVRLGEL CCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCC DHEQHILASFDNSAIEVQIALCQCLEHLHLTEALANKLYDKFVTASPEYQAYYLRALASH CCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TELSQQALAHLQQTERLEANELISIAGRNWTVLKQELSRSIYLEALARQPQAFFNQIFAD HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IVAIPSLRNHLLGELRNPNRSVQLSQAIGGLFKATSK HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCC >Mature Secondary Structure TEITTLSQFLTTAKTQFQVYELGRRVQHIDMLAFHQIESLVTPYPYPIQGHAQFAIVFW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE NESQQHFIWFLKLPLDEQGLLSPAPRSQFIEMVLTALGQDPTQPLTDEQQDRLANNPFSF CCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCC KPSQEKLAVFNALVRKQLGLSASIQYEFAVQYLSGQIAPSEWQHIGLQGLSDVCVRLGEL CCCHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCC DHEQHILASFDNSAIEVQIALCQCLEHLHLTEALANKLYDKFVTASPEYQAYYLRALASH CCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH TELSQQALAHLQQTERLEANELISIAGRNWTVLKQELSRSIYLEALARQPQAFFNQIFAD HHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH IVAIPSLRNHLLGELRNPNRSVQLSQAIGGLFKATSK HHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA