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The map label for this gene is yqcA [H]

Identifier: 117921264

GI number: 117921264

Start: 3372392

End: 3372856

Strand: Reverse

Name: yqcA [H]

Synonym: Shewana3_2823

Alternate gene names: 117921264

Gene position: 3372856-3372392 (Counterclockwise)

Preceding gene: 117921265

Following gene: 117921263

Centisome position: 67.83

GC content: 47.74

Gene sequence:

>465_bases
ATGAAAAAAGTTAATCTGGTGTTTGGCACTGTGTATGGTAGCGCACAATTTACCGCCGAAACCTTAGAAAAAGCGCTGAC
AGAACTCGGTTATGACGCCAGATTGTGGCAACCGAATGAAATTAGCCAATTTACGCCGCCACAGGATGAGTTGTTAGTGG
TAGTGACTTCGACCACTGGACAAGGGGATTTACCCGACGATATTCAGCCTTGGTATTATCATCTTAAGGAGACTGCGCCT
TATCTGCCCGAGCTGAAATACAGCGTAATCGCACTTGGTGATTCGAGTTACGATACCTTTTGCGGTGCGGGTAAATCGGT
AGATGAATTGCTCAGCGAGTTAGGCGCTAAACCCGTTGTGGCGCGTCTAGAAATTGATGCCTGTGAAACCATGGAACCCG
AGGTCGAAGCGATAAAATGGCTGGAAAGCTGGAATCAAATCGTCAAATCCGAACGCGCCGCTTAG

Upstream 100 bases:

>100_bases
AACTTGATTTATAAAATTTTTACCTTGTTGCTTGCCCTAAAGCCTCACAATAAAGTAACTTCAGCTAAGTTGCGTTTACG
CATGTGGCACGGAGTATATC

Downstream 100 bases:

>100_bases
GTCATTTCGTTACTCAGCAGTGGTTTAAATTTGCCCAGCGCTTAAGTCAGGCGCTGTTAATTCCGATTGCGATTTTGCCC
GCAGCGGGTGTGATGCTGGG

Product: flavodoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKKVNLVFGTVYGSAQFTAETLEKALTELGYDARLWQPNEISQFTPPQDELLVVVTSTTGQGDLPDDIQPWYYHLKETAP
YLPELKYSVIALGDSSYDTFCGAGKSVDELLSELGAKPVVARLEIDACETMEPEVEAIKWLESWNQIVKSERAA

Sequences:

>Translated_154_residues
MKKVNLVFGTVYGSAQFTAETLEKALTELGYDARLWQPNEISQFTPPQDELLVVVTSTTGQGDLPDDIQPWYYHLKETAP
YLPELKYSVIALGDSSYDTFCGAGKSVDELLSELGAKPVVARLEIDACETMEPEVEAIKWLESWNQIVKSERAA
>Mature_154_residues
MKKVNLVFGTVYGSAQFTAETLEKALTELGYDARLWQPNEISQFTPPQDELLVVVTSTTGQGDLPDDIQPWYYHLKETAP
YLPELKYSVIALGDSSYDTFCGAGKSVDELLSELGAKPVVARLEIDACETMEPEVEAIKWLESWNQIVKSERAA

Specific function: Probable electron transporter [H]

COG id: COG0716

COG function: function code C; Flavodoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Homo sapiens, GI169790958, Length=163, Percent_Identity=32.5153374233129, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI169790956, Length=163, Percent_Identity=32.5153374233129, Blast_Score=72, Evalue=2e-13,
Organism=Escherichia coli, GI1789154, Length=149, Percent_Identity=44.9664429530201, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI1790181, Length=149, Percent_Identity=32.8859060402685, Blast_Score=91, Evalue=3e-20,
Organism=Escherichia coli, GI1789123, Length=127, Percent_Identity=31.496062992126, Blast_Score=70, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17531441, Length=143, Percent_Identity=30.0699300699301, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17566446, Length=148, Percent_Identity=29.7297297297297, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001094
- InterPro:   IPR008254 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: NA

Molecular weight: Translated: 17149; Mature: 17149

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVNLVFGTVYGSAQFTAETLEKALTELGYDARLWQPNEISQFTPPQDELLVVVTSTTG
CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
QGDLPDDIQPWYYHLKETAPYLPELKYSVIALGDSSYDTFCGAGKSVDELLSELGAKPVV
CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCCHHHHHHHHCCCCEE
ARLEIDACETMEPEVEAIKWLESWNQIVKSERAA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKVNLVFGTVYGSAQFTAETLEKALTELGYDARLWQPNEISQFTPPQDELLVVVTSTTG
CCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
QGDLPDDIQPWYYHLKETAPYLPELKYSVIALGDSSYDTFCGAGKSVDELLSELGAKPVV
CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCHHHCCCCCHHHHHHHHCCCCEE
ARLEIDACETMEPEVEAIKWLESWNQIVKSERAA
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]