| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921179
Identifier: 117921179
GI number: 117921179
Start: 3269967
End: 3270791
Strand: Direct
Name: 117921179
Synonym: Shewana3_2738
Alternate gene names: NA
Gene position: 3269967-3270791 (Clockwise)
Preceding gene: 117921176
Following gene: 117921180
Centisome position: 65.76
GC content: 46.91
Gene sequence:
>825_bases ATGTTAGGAACGCTAAAAAAGCTGCGCGCACACTTAGATGAGGCGCAACAAGTACAGTATCAACTGGTTGTTGGCGACGA CTTGCTGCCACTGAATCCCTTAATTGGCAAGCCGCTGACCCTGACCCACACAGGTAACATCTTCTGCTGTAACTGCGGCA AAAAGACCAAAAAAAGCTATTCGCAAGGCCATTGCTTTGTGTGCATGCAAAAGCTCGCCAGCTGCGATATGTGCATTATG AAGCCCGAAACCTGTCACTTTGACCAAGGTACTTGCCGCGAGCCAGAGTGGGCGCAAAGCCATTGTTTTGTGCCGCATTA TGTTTATCTATCCAATACTTCGGGCATCAAGGTCGGTATCACTCGCCACACCCAATTGCCTACTCGCTGGATAGATCAGG GTGCGACTCAAGGGTTACCGATTTTTAAAGTGTCCACACGACAAATCTCGGGTTTAGTGGAAGTGGAGTTAGCCAAACTC ATCAACGATAAAACCCACTGGCAAACCATGCTTAAGGGCCACGCCGATGATATCGATTTAAATGCTAAGGCTGCGGAACT GATCCCGCAAATTGAGGCTAAGTTACACGAAATCGGCATGCAAAAAGGCGATTACAGCATCGAACGTTTAGATGAAACGA TTCAGTCGATTCACTATCCCATCGACACCTTTCCGAAGAAGATCACTTCCCACAACTTCGATAAAAATGAGATGGTAAGC GGGATTTTACAGGGGATTAAAGGTCAGTATCTGATCTTCGATACGGGCGTGATTAATATTCGCAAATTCACCGCCTATGA AGTCAGCGTAGCGTTAGCTGACTAA
Upstream 100 bases:
>100_bases GGGATAATCTTGTATACTGCACACCACGCAATGACGAATGCATAAGTGCGCTGGGATGTCTTACCAACTCCAGTGACACC ATAAAAAACTAGGAACACCT
Downstream 100 bases:
>100_bases TATAAGTTAAAATTCCTGTCAAATTAGTGTGTTGAGCGCTGCTATGGCAGTCAGCACACTTATTGCTAAACCGTTAGATG ACAGTAGTGAAGCCTCTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSYSQGHCFVCMQKLASCDMCIM KPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKL INDKTHWQTMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD
Sequences:
>Translated_274_residues MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSYSQGHCFVCMQKLASCDMCIM KPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKL INDKTHWQTMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD >Mature_274_residues MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSYSQGHCFVCMQKLASCDMCIM KPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKL INDKTHWQTMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30803; Mature: 30803
Theoretical pI: Translated: 7.52; Mature: 7.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSY CCCCHHHHHHHHCHHHHEEEEEEECCCCCCCCHHCCCCEEEEECCCEEEECCCCHHHHHC SQGHCFVCMQKLASCDMCIMKPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKLINDKTHWQTMLKGHADDIDL EECCCCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC NAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD HHHHHCCCCEEEEECCEEEEEEEEEEEEEEEECC >Mature Secondary Structure MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSY CCCCHHHHHHHHCHHHHEEEEEEECCCCCCCCHHCCCCEEEEECCCEEEECCCCHHHHHC SQGHCFVCMQKLASCDMCIMKPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGI CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE TRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKLINDKTHWQTMLKGHADDIDL EECCCCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC NAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD HHHHHCCCCEEEEECCEEEEEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA