Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921179

Identifier: 117921179

GI number: 117921179

Start: 3269967

End: 3270791

Strand: Direct

Name: 117921179

Synonym: Shewana3_2738

Alternate gene names: NA

Gene position: 3269967-3270791 (Clockwise)

Preceding gene: 117921176

Following gene: 117921180

Centisome position: 65.76

GC content: 46.91

Gene sequence:

>825_bases
ATGTTAGGAACGCTAAAAAAGCTGCGCGCACACTTAGATGAGGCGCAACAAGTACAGTATCAACTGGTTGTTGGCGACGA
CTTGCTGCCACTGAATCCCTTAATTGGCAAGCCGCTGACCCTGACCCACACAGGTAACATCTTCTGCTGTAACTGCGGCA
AAAAGACCAAAAAAAGCTATTCGCAAGGCCATTGCTTTGTGTGCATGCAAAAGCTCGCCAGCTGCGATATGTGCATTATG
AAGCCCGAAACCTGTCACTTTGACCAAGGTACTTGCCGCGAGCCAGAGTGGGCGCAAAGCCATTGTTTTGTGCCGCATTA
TGTTTATCTATCCAATACTTCGGGCATCAAGGTCGGTATCACTCGCCACACCCAATTGCCTACTCGCTGGATAGATCAGG
GTGCGACTCAAGGGTTACCGATTTTTAAAGTGTCCACACGACAAATCTCGGGTTTAGTGGAAGTGGAGTTAGCCAAACTC
ATCAACGATAAAACCCACTGGCAAACCATGCTTAAGGGCCACGCCGATGATATCGATTTAAATGCTAAGGCTGCGGAACT
GATCCCGCAAATTGAGGCTAAGTTACACGAAATCGGCATGCAAAAAGGCGATTACAGCATCGAACGTTTAGATGAAACGA
TTCAGTCGATTCACTATCCCATCGACACCTTTCCGAAGAAGATCACTTCCCACAACTTCGATAAAAATGAGATGGTAAGC
GGGATTTTACAGGGGATTAAAGGTCAGTATCTGATCTTCGATACGGGCGTGATTAATATTCGCAAATTCACCGCCTATGA
AGTCAGCGTAGCGTTAGCTGACTAA

Upstream 100 bases:

>100_bases
GGGATAATCTTGTATACTGCACACCACGCAATGACGAATGCATAAGTGCGCTGGGATGTCTTACCAACTCCAGTGACACC
ATAAAAAACTAGGAACACCT

Downstream 100 bases:

>100_bases
TATAAGTTAAAATTCCTGTCAAATTAGTGTGTTGAGCGCTGCTATGGCAGTCAGCACACTTATTGCTAAACCGTTAGATG
ACAGTAGTGAAGCCTCTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSYSQGHCFVCMQKLASCDMCIM
KPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKL
INDKTHWQTMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS
GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD

Sequences:

>Translated_274_residues
MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSYSQGHCFVCMQKLASCDMCIM
KPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKL
INDKTHWQTMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS
GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD
>Mature_274_residues
MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSYSQGHCFVCMQKLASCDMCIM
KPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGITRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKL
INDKTHWQTMLKGHADDIDLNAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS
GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30803; Mature: 30803

Theoretical pI: Translated: 7.52; Mature: 7.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSY
CCCCHHHHHHHHCHHHHEEEEEEECCCCCCCCHHCCCCEEEEECCCEEEECCCCHHHHHC
SQGHCFVCMQKLASCDMCIMKPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGI
CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE
TRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKLINDKTHWQTMLKGHADDIDL
EECCCCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
NAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH
GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD
HHHHHCCCCEEEEECCEEEEEEEEEEEEEEEECC
>Mature Secondary Structure
MLGTLKKLRAHLDEAQQVQYQLVVGDDLLPLNPLIGKPLTLTHTGNIFCCNCGKKTKKSY
CCCCHHHHHHHHCHHHHEEEEEEECCCCCCCCHHCCCCEEEEECCCEEEECCCCHHHHHC
SQGHCFVCMQKLASCDMCIMKPETCHFDQGTCREPEWAQSHCFVPHYVYLSNTSGIKVGI
CCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEEE
TRHTQLPTRWIDQGATQGLPIFKVSTRQISGLVEVELAKLINDKTHWQTMLKGHADDIDL
EECCCCCHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
NAKAAELIPQIEAKLHEIGMQKGDYSIERLDETIQSIHYPIDTFPKKITSHNFDKNEMVS
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHH
GILQGIKGQYLIFDTGVINIRKFTAYEVSVALAD
HHHHHCCCCEEEEECCEEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA