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The map label for this gene is yyaM [H]

Identifier: 117921164

GI number: 117921164

Start: 3254148

End: 3255077

Strand: Direct

Name: yyaM [H]

Synonym: Shewana3_2723

Alternate gene names: 117921164

Gene position: 3254148-3255077 (Clockwise)

Preceding gene: 117921162

Following gene: 117921165

Centisome position: 65.45

GC content: 49.14

Gene sequence:

>930_bases
ATGAAATCTGATCCAACGATAAAAGCAGTTATCCTGCTGATTATCTGTACCTTCTTTTGGGGGAGTTGCTTTCCCATTGG
CAAACAAGTGTTAAGCGAAGTGCATGCCTTGACCTTAGTGTTCTGGCGCTTTGTGATTGCCGCGGTCTGTCTCGCGATTT
ACCTCAAGCTCGTCCGTATGCCGAAATTGCACTTAAGCATCAATCAATGGCTGTGGATTATCCTCGTCAGCGCGGTAGGT
ATAGGCGGGCTAAACCTGGGTCTATTCACGGGATTGGCGTCAACTAATGCGACAAACGGCTCATTAATCATGGCCCTTAG
CCCGCTCATCACGTCACTGATTGCCTGTGTTACCCTGCGTACGCTGCCATCATTTGCCCAGTGTTTTAGTCTGCTGGTGA
GTCTCACCGGTGTGCTGATGGTGATCACCAATGGGCACCTTGAAACCCTCTTCTCGATGCAGATAAACCACGGAGATAAA
TTAATATTTGGCGGGATGCTGGCCTGGAGTTTTTACACCTATTTCAGTCAAGGTATCAGCCGCTGGATGCCAGTAATCCC
CTATACCTTTATCGGCATGTTGAGTGGCGCTGCCGTGATTGGCGCTTTATGTTTGGCATCGCCAGAGGTGCATCCCTTCG
CTGAGTTATTCAATAGTACGGCGCTAGGCATGGCCGAAGTCGTCTATATCGGCGTATTTGGTACGGTTGCAGGCTATTTA
TTGTGGCTAAATGGCGTGCGTCAGTTAGGCTCAGCCAACGCAGCACTGTTTTTTAACTTTGTCCCCATCTTCTCCGTATT
AACCTCGTTTATGCTCGGCCAAGCCGTTACCGAGTTGCAACTGTTAGGGATTATCGTTGTTATCGCAGGCTTACTGCTAC
CGCGAATTATTCGGTTTAAACGCGAGCCCAAAGTGTGCCCTGAATCCTAG

Upstream 100 bases:

>100_bases
GTTTCATTATTGGTATTTACCGTCTTACTTTTGCTTGTTTATCCAATTATTGAAATCAATACACTAAGGCTCAGTATTTA
ACAAGTCATCTGGAGTGGCG

Downstream 100 bases:

>100_bases
CCAATCCTCAAATTACGTAATAAAGGCGGGAACTTCTCGCCTTTATTATTCGCTATAGCGCCTAGGATAAGTCATTTCAG
TTATTGGGGCTGATTTGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKSDPTIKAVILLIICTFFWGSCFPIGKQVLSEVHALTLVFWRFVIAAVCLAIYLKLVRMPKLHLSINQWLWIILVSAVG
IGGLNLGLFTGLASTNATNGSLIMALSPLITSLIACVTLRTLPSFAQCFSLLVSLTGVLMVITNGHLETLFSMQINHGDK
LIFGGMLAWSFYTYFSQGISRWMPVIPYTFIGMLSGAAVIGALCLASPEVHPFAELFNSTALGMAEVVYIGVFGTVAGYL
LWLNGVRQLGSANAALFFNFVPIFSVLTSFMLGQAVTELQLLGIIVVIAGLLLPRIIRFKREPKVCPES

Sequences:

>Translated_309_residues
MKSDPTIKAVILLIICTFFWGSCFPIGKQVLSEVHALTLVFWRFVIAAVCLAIYLKLVRMPKLHLSINQWLWIILVSAVG
IGGLNLGLFTGLASTNATNGSLIMALSPLITSLIACVTLRTLPSFAQCFSLLVSLTGVLMVITNGHLETLFSMQINHGDK
LIFGGMLAWSFYTYFSQGISRWMPVIPYTFIGMLSGAAVIGALCLASPEVHPFAELFNSTALGMAEVVYIGVFGTVAGYL
LWLNGVRQLGSANAALFFNFVPIFSVLTSFMLGQAVTELQLLGIIVVIAGLLLPRIIRFKREPKVCPES
>Mature_309_residues
MKSDPTIKAVILLIICTFFWGSCFPIGKQVLSEVHALTLVFWRFVIAAVCLAIYLKLVRMPKLHLSINQWLWIILVSAVG
IGGLNLGLFTGLASTNATNGSLIMALSPLITSLIACVTLRTLPSFAQCFSLLVSLTGVLMVITNGHLETLFSMQINHGDK
LIFGGMLAWSFYTYFSQGISRWMPVIPYTFIGMLSGAAVIGALCLASPEVHPFAELFNSTALGMAEVVYIGVFGTVAGYL
LWLNGVRQLGSANAALFFNFVPIFSVLTSFMLGQAVTELQLLGIIVVIAGLLLPRIIRFKREPKVCPES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33585; Mature: 33585

Theoretical pI: Translated: 8.88; Mature: 8.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCCC
>Mature Secondary Structure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CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]