| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117921162
Identifier: 117921162
GI number: 117921162
Start: 3252719
End: 3253114
Strand: Direct
Name: 117921162
Synonym: Shewana3_2721
Alternate gene names: NA
Gene position: 3252719-3253114 (Clockwise)
Preceding gene: 117921158
Following gene: 117921164
Centisome position: 65.42
GC content: 48.99
Gene sequence:
>396_bases ATGCGCGTGACCCGTCTAGACCATTTAGTGTTAACCGTGAAAGATATCGAGGCCAGCGTCGACTTTTATCAACGCGTGTT AGGGATGAAAAAGTCCGTCTTTGGTCAGGGCCGTATCGCCTTAAATTTTGGCGATCAAAAAATCAATCTGCACCAAGCGG GCGCCGAATTTGAACCTAAGGCAAACCTTGCCACGCCAGGCAGTGCCGATCTTTGCTTTGTAGTTAGCCACAATATCGAA GAAGTGATTAACCACTTAAACAGCCTTGAAGTTGCAATTATTGAAGGCCCAGTACTGCGCACCGGCGCCACAGGCCGCAT CAACTCCGTCTATATCCGCGACCCCGATTTGAATCTATTGGAATTATCCGAATATCTGCCCGCCTGCGCGCTATAA
Upstream 100 bases:
>100_bases AAGCGCGTTAAATGCTACCACAGAGTCACTTTTGCACCAGCACTTGATGTAAGGTAAGGCGCAGAGAACACCAAACCGCT ACGGCATCGAGGGAAAGAAT
Downstream 100 bases:
>100_bases ACCCAACGCGCTCAAATGTCGGTGTTCCTTGGCTGGCGGAATAACGCGAGCCCTAGTTAAAGTGCAATTTCACAAACTCG ATAAACAACCGCACCCGCAT
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MRVTRLDHLVLTVKDIEASVDFYQRVLGMKKSVFGQGRIALNFGDQKINLHQAGAEFEPKANLATPGSADLCFVVSHNIE EVINHLNSLEVAIIEGPVLRTGATGRINSVYIRDPDLNLLELSEYLPACAL
Sequences:
>Translated_131_residues MRVTRLDHLVLTVKDIEASVDFYQRVLGMKKSVFGQGRIALNFGDQKINLHQAGAEFEPKANLATPGSADLCFVVSHNIE EVINHLNSLEVAIIEGPVLRTGATGRINSVYIRDPDLNLLELSEYLPACAL >Mature_131_residues MRVTRLDHLVLTVKDIEASVDFYQRVLGMKKSVFGQGRIALNFGDQKINLHQAGAEFEPKANLATPGSADLCFVVSHNIE EVINHLNSLEVAIIEGPVLRTGATGRINSVYIRDPDLNLLELSEYLPACAL
Specific function: Is critically involved in promoting the replication of S.typhimurium cells inside host macrophages, suggesting a role in the establishment of bacterial colonization within macrophages. May be involved in the biosynthesis and modification of the peptidogly
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI254039722, Length=124, Percent_Identity=53.2258064516129, Blast_Score=145, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14416; Mature: 14416
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVTRLDHLVLTVKDIEASVDFYQRVLGMKKSVFGQGRIALNFGDQKINLHQAGAEFEPK CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCC ANLATPGSADLCFVVSHNIEEVINHLNSLEVAIIEGPVLRTGATGRINSVYIRDPDLNLL CCCCCCCCCCEEEEEECCHHHHHHHHCCEEEEEEECCEEECCCCCCCCEEEEECCCCCHH ELSEYLPACAL HHHHHCCCCCC >Mature Secondary Structure MRVTRLDHLVLTVKDIEASVDFYQRVLGMKKSVFGQGRIALNFGDQKINLHQAGAEFEPK CCCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCC ANLATPGSADLCFVVSHNIEEVINHLNSLEVAIIEGPVLRTGATGRINSVYIRDPDLNLL CCCCCCCCCCEEEEEECCHHHHHHHHCCEEEEEEECCEEECCCCCCCCEEEEECCCCCHH ELSEYLPACAL HHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]