Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921158

Identifier: 117921158

GI number: 117921158

Start: 3248618

End: 3248851

Strand: Direct

Name: 117921158

Synonym: Shewana3_2717

Alternate gene names: NA

Gene position: 3248618-3248851 (Clockwise)

Preceding gene: 117921144

Following gene: 117921162

Centisome position: 65.34

GC content: 55.56

Gene sequence:

>234_bases
ATGCTCTCCCCCTGCGTCGCCCGCTGCGGCTTAAATGATGAAGATTATTGCATGGGCTGTTTTCGCCATATCGATGAGAT
TGTCGCTTGGCGCGATGCCAGCGATGCAGAACACGCCGCGATTATCGCGCAACTTCCCGCCCGCAAAGCCCATTTCGAAG
GCGACGAAAATCAACAGGTGCTAAGCCGCGCTAAATGGCTGGAAGCCGAGGCTCGACTTGCGAAAAAAGCCTGA

Upstream 100 bases:

>100_bases
AGCCTGCTTTACTCACTTGTAAGCATGGGATACGCCTTAACGCTGTGACTTCACCCATTGAACCCGATAACGAAAACGAA
AACGAGTTAAGAGGAAAACT

Downstream 100 bases:

>100_bases
AAGTTCAGGCTTTTTACTTTTATCACTACTTTTTCATCATCGCCTTTAAATCGGCAAAGGGATTATAGGTCGCGGCCGCT
TGCTTGGTTTCGGTGGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MLSPCVARCGLNDEDYCMGCFRHIDEIVAWRDASDAEHAAIIAQLPARKAHFEGDENQQVLSRAKWLEAEARLAKKA

Sequences:

>Translated_77_residues
MLSPCVARCGLNDEDYCMGCFRHIDEIVAWRDASDAEHAAIIAQLPARKAHFEGDENQQVLSRAKWLEAEARLAKKA
>Mature_77_residues
MLSPCVARCGLNDEDYCMGCFRHIDEIVAWRDASDAEHAAIIAQLPARKAHFEGDENQQVLSRAKWLEAEARLAKKA

Specific function: Unknown

COG id: COG3313

COG function: function code R; Predicted Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8642; Mature: 8642

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPCVARCGLNDEDYCMGCFRHIDEIVAWRDASDAEHAAIIAQLPARKAHFEGDENQQV
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
LSRAKWLEAEARLAKKA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSPCVARCGLNDEDYCMGCFRHIDEIVAWRDASDAEHAAIIAQLPARKAHFEGDENQQV
CCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
LSRAKWLEAEARLAKKA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA