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The map label for this gene is agaS [H]

Identifier: 117921140

GI number: 117921140

Start: 3225306

End: 3226466

Strand: Reverse

Name: agaS [H]

Synonym: Shewana3_2699

Alternate gene names: 117921140

Gene position: 3226466-3225306 (Counterclockwise)

Preceding gene: 117921141

Following gene: 117921139

Centisome position: 64.89

GC content: 49.61

Gene sequence:

>1161_bases
ATGTTAACCAGTCCTCTTTCTCCATTCGAACATGAAGATAGCAACCTGTTATTGAGTGCAGAGCAATTAACCCAATATGG
CGCCTTTTGGACGGCGAAGGAAATCAGCCAGCAGCCGAAAATGTGGCGCAAAGTGAGCGAGCAGCACAGTGATAATCGCA
CTATTGCAGCTTGGTTAACGCCGATTCTGGCAAAGCCGCAGTTAAGGATTATCCTGACAGGAGCTGGGACGTCGGCCTAT
ATAGGTGATGTGCTCGCGGCCCATATTCAGCAGCATTTACCTTTGGCAACCCAACAAGTCGAAGCCATCAGCACCACGGA
TATTGTGAGTCACCCAGAGCTGTATCTGCGAGGCAATATTCCCACGCTGCTGATTTCCTACGGCCGCTCGGGAAACAGCC
CCGAGAGTATGGCGGCGGTCGAACTGGCAGAGCAATTGGTCGATGATTGTTACCATCTGGCGATCACCTGTAATGGTCAG
GGAAAGCTCGCCAACTATTGCGCCGACAAATCCCACTGCTACTTGTATAAGTTGCCCGATGAAACCCACGACGTGAGTTT
TGCCATGACCAGCAGCTTTACCTGTATGTACTTGGCGACATTACTGATTTTTGCGCCAAACTCTCAGGCATTGATGCAAT
GCATCGAGATGGCCGAGCACATCTTAACTGAGCGGTTAGCTGACATCCGTCTGCAATCCGAGCAGCCCAGCAAGCGGGTG
GTTTTCCTCGGTGGCGGGCCACTTAAGGCCATCGCCCAAGAGGCGGCGCTTAAGTACCTTGAACTCACCGCTGGGCAAGT
GGTGAGTGCCTTTGAGAGCCCGCTCGGGTTTCGCCACGGGCCAAAATCTTTAGTCGATAGTCATACGCAAGTGCTAGTGA
TGATGTCGTCGGATCCCTATACTCGTCAATATGATAACGATTTAATTCAAGAGCTTAAGCGAGATAATCAAGCATTATCT
GTCTTGACGCTCTCCGAAGAACTGTTAACTGGCAGCAGTGGCCTTAACGAAGTCTGGTTGGGATTACCCTTTATTTTGTG
GTGTCAAATCCTAGCCATCTATAAAGCGATTCAACTTAAAGTATCGCCAGATAATCCTTGTCCTACGGGGCAAGTTAATC
GAGTTGTGCAGGGTGTCAATGTATATCCCTTTGTAAAATAA

Upstream 100 bases:

>100_bases
CGTGAACTCGTGCTGCATAAAATTACCGAAGTATTGGCCGATTACGCCAATGCCTGCCAGCTTCCTGTGATGCAATCACC
TTTAAAGGGATGATATTTTG

Downstream 100 bases:

>100_bases
ATATAAATAAGGGCAAGGGCATGTATTACGGTTTAGATATAGGTGGAACAAAGATTGAGTTAGCGATTTTTGATACTCAA
TTAGCGCTACAGGATAAGTG

Product: sugar isomerase (SIS)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MLTSPLSPFEHEDSNLLLSAEQLTQYGAFWTAKEISQQPKMWRKVSEQHSDNRTIAAWLTPILAKPQLRIILTGAGTSAY
IGDVLAAHIQQHLPLATQQVEAISTTDIVSHPELYLRGNIPTLLISYGRSGNSPESMAAVELAEQLVDDCYHLAITCNGQ
GKLANYCADKSHCYLYKLPDETHDVSFAMTSSFTCMYLATLLIFAPNSQALMQCIEMAEHILTERLADIRLQSEQPSKRV
VFLGGGPLKAIAQEAALKYLELTAGQVVSAFESPLGFRHGPKSLVDSHTQVLVMMSSDPYTRQYDNDLIQELKRDNQALS
VLTLSEELLTGSSGLNEVWLGLPFILWCQILAIYKAIQLKVSPDNPCPTGQVNRVVQGVNVYPFVK

Sequences:

>Translated_386_residues
MLTSPLSPFEHEDSNLLLSAEQLTQYGAFWTAKEISQQPKMWRKVSEQHSDNRTIAAWLTPILAKPQLRIILTGAGTSAY
IGDVLAAHIQQHLPLATQQVEAISTTDIVSHPELYLRGNIPTLLISYGRSGNSPESMAAVELAEQLVDDCYHLAITCNGQ
GKLANYCADKSHCYLYKLPDETHDVSFAMTSSFTCMYLATLLIFAPNSQALMQCIEMAEHILTERLADIRLQSEQPSKRV
VFLGGGPLKAIAQEAALKYLELTAGQVVSAFESPLGFRHGPKSLVDSHTQVLVMMSSDPYTRQYDNDLIQELKRDNQALS
VLTLSEELLTGSSGLNEVWLGLPFILWCQILAIYKAIQLKVSPDNPCPTGQVNRVVQGVNVYPFVK
>Mature_386_residues
MLTSPLSPFEHEDSNLLLSAEQLTQYGAFWTAKEISQQPKMWRKVSEQHSDNRTIAAWLTPILAKPQLRIILTGAGTSAY
IGDVLAAHIQQHLPLATQQVEAISTTDIVSHPELYLRGNIPTLLISYGRSGNSPESMAAVELAEQLVDDCYHLAITCNGQ
GKLANYCADKSHCYLYKLPDETHDVSFAMTSSFTCMYLATLLIFAPNSQALMQCIEMAEHILTERLADIRLQSEQPSKRV
VFLGGGPLKAIAQEAALKYLELTAGQVVSAFESPLGFRHGPKSLVDSHTQVLVMMSSDPYTRQYDNDLIQELKRDNQALS
VLTLSEELLTGSSGLNEVWLGLPFILWCQILAIYKAIQLKVSPDNPCPTGQVNRVVQGVNVYPFVK

Specific function: May be a tagatose-6-phosphate ketose/aldose isomerase [H]

COG id: COG2222

COG function: function code M; Predicted phosphosugar isomerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 SIS domains [H]

Homologues:

Organism=Escherichia coli, GI1789525, Length=372, Percent_Identity=45.1612903225806, Blast_Score=310, Evalue=1e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001347
- InterPro:   IPR014180 [H]

Pfam domain/function: PF01380 SIS [H]

EC number: 5.-.-.- [C]

Molecular weight: Translated: 42692; Mature: 42692

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSPLSPFEHEDSNLLLSAEQLTQYGAFWTAKEISQQPKMWRKVSEQHSDNRTIAAWLT
CCCCCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCEEHHHHH
PILAKPQLRIILTGAGTSAYIGDVLAAHIQQHLPLATQQVEAISTTDIVSHPELYLRGNI
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCC
PTLLISYGRSGNSPESMAAVELAEQLVDDCYHLAITCNGQGKLANYCADKSHCYLYKLPD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHCCCCCEEEEECCC
ETHDVSFAMTSSFTCMYLATLLIFAPNSQALMQCIEMAEHILTERLADIRLQSEQPSKRV
CCCCEEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEE
VFLGGGPLKAIAQEAALKYLELTAGQVVSAFESPLGFRHGPKSLVDSHTQVLVMMSSDPY
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCC
TRQYDNDLIQELKRDNQALSVLTLSEELLTGSSGLNEVWLGLPFILWCQILAIYKAIQLK
CHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
VSPDNPCPTGQVNRVVQGVNVYPFVK
ECCCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTSPLSPFEHEDSNLLLSAEQLTQYGAFWTAKEISQQPKMWRKVSEQHSDNRTIAAWLT
CCCCCCCCCCCCCCCEEEEHHHHHHHCCCHHHHHHHHCHHHHHHHHHHCCCCCEEHHHHH
PILAKPQLRIILTGAGTSAYIGDVLAAHIQQHLPLATQQVEAISTTDIVSHPELYLRGNI
HHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEECCC
PTLLISYGRSGNSPESMAAVELAEQLVDDCYHLAITCNGQGKLANYCADKSHCYLYKLPD
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHCCCCCEEEEECCC
ETHDVSFAMTSSFTCMYLATLLIFAPNSQALMQCIEMAEHILTERLADIRLQSEQPSKRV
CCCCEEEEHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEE
VFLGGGPLKAIAQEAALKYLELTAGQVVSAFESPLGFRHGPKSLVDSHTQVLVMMSSDPY
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCCC
TRQYDNDLIQELKRDNQALSVLTLSEELLTGSSGLNEVWLGLPFILWCQILAIYKAIQLK
CHHHHHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE
VSPDNPCPTGQVNRVVQGVNVYPFVK
ECCCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 8932697 [H]