Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is 117921130

Identifier: 117921130

GI number: 117921130

Start: 3216571

End: 3216978

Strand: Direct

Name: 117921130

Synonym: Shewana3_2689

Alternate gene names: NA

Gene position: 3216571-3216978 (Clockwise)

Preceding gene: 117921129

Following gene: 117921131

Centisome position: 64.69

GC content: 46.81

Gene sequence:

>408_bases
GTGTTAATACACCTCACAAGACAAGGAATGGCGATGTACTTTATTGCGGCTTTTGGCCTATTGATGCTGTTCTTTAGCCT
TGTAATGGTCATTAGGCCTGCGGCGTTCGCGGATGGCATTATCGCATTTAGCGAGCAGCCCTACTTCCATATTGTTGAAG
TGGTTAGCCGAATTATTGCGGGTGTGATTTTTATCCAATATTGCGCCGACACCCGATTTCCAGCGCTCTTTTTTGCGATA
GGCATTGTCTTACTCTGTGTGGGAATAGGCTTGGCATGCACGCCGCCAAGTAAGCATCGTAAATTTGCCCTATGGTCAGC
CCAAGCGTTTAAGAATCAATTTCGCTTAATCGGTGTTGTTTCCGTCCCGCTCTCTTTGCTACTGATTTATGCTGCTGGCA
TCGCCTAA

Upstream 100 bases:

>100_bases
GTAAAAGAGCTCTGGTAAGGCTTGTGCGATTAAAGAGGGGAAATCGATACAGGCTTAAAGCTATTGCGGTGAACAGTATC
GATTAAGCCATTGAATAAAG

Downstream 100 bases:

>100_bases
AACTGAGTGATATTCAGCTCCAACTTCCACGACTTTAGCGCCGAATGTAAAAGCGCAAGATTCGGGTCGAGTAACCTGCC
CTAACCCTTCACTATGTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MLIHLTRQGMAMYFIAAFGLLMLFFSLVMVIRPAAFADGIIAFSEQPYFHIVEVVSRIIAGVIFIQYCADTRFPALFFAI
GIVLLCVGIGLACTPPSKHRKFALWSAQAFKNQFRLIGVVSVPLSLLLIYAAGIA

Sequences:

>Translated_135_residues
MLIHLTRQGMAMYFIAAFGLLMLFFSLVMVIRPAAFADGIIAFSEQPYFHIVEVVSRIIAGVIFIQYCADTRFPALFFAI
GIVLLCVGIGLACTPPSKHRKFALWSAQAFKNQFRLIGVVSVPLSLLLIYAAGIA
>Mature_135_residues
MLIHLTRQGMAMYFIAAFGLLMLFFSLVMVIRPAAFADGIIAFSEQPYFHIVEVVSRIIAGVIFIQYCADTRFPALFFAI
GIVLLCVGIGLACTPPSKHRKFALWSAQAFKNQFRLIGVVSVPLSLLLIYAAGIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14859; Mature: 14859

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIHLTRQGMAMYFIAAFGLLMLFFSLVMVIRPAAFADGIIAFSEQPYFHIVEVVSRIIA
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHH
GVIFIQYCADTRFPALFFAIGIVLLCVGIGLACTPPSKHRKFALWSAQAFKNQFRLIGVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SVPLSLLLIYAAGIA
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MLIHLTRQGMAMYFIAAFGLLMLFFSLVMVIRPAAFADGIIAFSEQPYFHIVEVVSRIIA
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCHHHHHHHHHHHHH
GVIFIQYCADTRFPALFFAIGIVLLCVGIGLACTPPSKHRKFALWSAQAFKNQFRLIGVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SVPLSLLLIYAAGIA
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA