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The map label for this gene is 117921121

Identifier: 117921121

GI number: 117921121

Start: 3204085

End: 3204798

Strand: Direct

Name: 117921121

Synonym: Shewana3_2680

Alternate gene names: NA

Gene position: 3204085-3204798 (Clockwise)

Preceding gene: 117921120

Following gene: 117921123

Centisome position: 64.44

GC content: 53.64

Gene sequence:

>714_bases
ATGATGACAGACATATCGCGCCCAGCTAGCGAGCCAAACTGCTCAGCCGAGCTAAGTGAACTGCTCAAACAAATCCGCGC
TTGCCAACTGTGTCAGGCCGAATTGCCCCTGCCAGCAAAACCCATCTTGCAAGCCAGTAGCCAAGCACGGATCTTAATTG
CTGGCCAAGCCCCCGGCGTAAAAACCCACCATAAGGGCATTCCCTTCGACGATGCCAGTGGCGAGCGGCTGCGCGCTTGG
CTTAATGTCAGTCGGGAACAATTTTATGACCCCGCGCTGTTTGCCATAGTGCCGATGGGATTTTGTTTTCCGGGAACCAT
TGAACGCAATGGTAAAAAGCAGGGTGATAAGCCACCACGCCCTGAATGCGCCGCAACTTGGCATGCGAAGTTATTAGCCT
TGATGCCACAGATAGAGTTAGTGCTGGTCCTTGGCCAATATGCGATTGATTACCACCTGCCGCGCGCGCAGGCCATAGGC
GCGTTAAACTCCCAAGCGATAGCGGTATCGAACCCACAAGCGAACAAGAAGATCACAGTAACCCAAGCCATTGAGCAATG
GTCGTTACATTGGCCTAGGCTGATGGTCATGCCCCACCCAAGCCCACGCAACAATCTTTGGCTAAAACAGCATCCCGAGT
TTGAGCACGAACACCTCCCCACTCTTCAAGCAAGGATCGCAGACCTACTGGCGAGCACTCCCGATCCGAAATAA

Upstream 100 bases:

>100_bases
AAGCCTTGGGCAGCAAGTTATTGAGTTATGGTGTATTAGCCGCGTCCTATGCGCTCTTTGGCTATTGGATCTACCATCTA
TTGAGCAAACTTGGTGCTTG

Downstream 100 bases:

>100_bases
AACCTGCTCAAATCCCAATAAAAAGCCCCATTAAGGGGCTTCGAAATTAGAACTTGGAAACTGGAACTTAGAAACGGTTT
TAGGCTTACGGCTTAATTGT

Product: phage SPO1 DNA polymerase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MMTDISRPASEPNCSAELSELLKQIRACQLCQAELPLPAKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRAW
LNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAATWHAKLLALMPQIELVLVLGQYAIDYHLPRAQAIG
ALNSQAIAVSNPQANKKITVTQAIEQWSLHWPRLMVMPHPSPRNNLWLKQHPEFEHEHLPTLQARIADLLASTPDPK

Sequences:

>Translated_237_residues
MMTDISRPASEPNCSAELSELLKQIRACQLCQAELPLPAKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRAW
LNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAATWHAKLLALMPQIELVLVLGQYAIDYHLPRAQAIG
ALNSQAIAVSNPQANKKITVTQAIEQWSLHWPRLMVMPHPSPRNNLWLKQHPEFEHEHLPTLQARIADLLASTPDPK
>Mature_237_residues
MMTDISRPASEPNCSAELSELLKQIRACQLCQAELPLPAKPILQASSQARILIAGQAPGVKTHHKGIPFDDASGERLRAW
LNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPRPECAATWHAKLLALMPQIELVLVLGQYAIDYHLPRAQAIG
ALNSQAIAVSNPQANKKITVTQAIEQWSLHWPRLMVMPHPSPRNNLWLKQHPEFEHEHLPTLQARIADLLASTPDPK

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 26340; Mature: 26340

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTDISRPASEPNCSAELSELLKQIRACQLCQAELPLPAKPILQASSQARILIAGQAPGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCC
KTHHKGIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PECAATWHAKLLALMPQIELVLVLGQYAIDYHLPRAQAIGALNSQAIAVSNPQANKKITV
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCCCEEEH
TQAIEQWSLHWPRLMVMPHPSPRNNLWLKQHPEFEHEHLPTLQARIADLLASTPDPK
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMTDISRPASEPNCSAELSELLKQIRACQLCQAELPLPAKPILQASSQARILIAGQAPGV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEEEECCCCCC
KTHHKGIPFDDASGERLRAWLNVSREQFYDPALFAIVPMGFCFPGTIERNGKKQGDKPPR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PECAATWHAKLLALMPQIELVLVLGQYAIDYHLPRAQAIGALNSQAIAVSNPQANKKITV
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCCCEEEH
TQAIEQWSLHWPRLMVMPHPSPRNNLWLKQHPEFEHEHLPTLQARIADLLASTPDPK
HHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]