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The map label for this gene is pspC [H]

Identifier: 117921087

GI number: 117921087

Start: 3160602

End: 3160988

Strand: Reverse

Name: pspC [H]

Synonym: Shewana3_2646

Alternate gene names: 117921087

Gene position: 3160988-3160602 (Counterclockwise)

Preceding gene: 117921088

Following gene: 117921086

Centisome position: 63.57

GC content: 44.44

Gene sequence:

>387_bases
ATGAGAGGAACTAGTGGCCGTACTATGTATCGTATTCCCCAGTCAGGTAAAGTCGCAGGTGTGTGTGCGGGGATAGCCGA
ATACTTTGCAATTGAAACATGGTTAGTGCGAGTACTTGCGGTTTCTATCTTCCTATTAGGTGGTTCGGGCGTCGTGTTTA
TCATCTATGTTGCGTTATGGGTGATACTCGACATCAAACCCCAAAATAGCACTGTTAGGGATGACATTGAGGTGAAGAAG
AAACCTTGGCAATCGGGAGAGCCTGCTAAACAAGCGCTGAGCGATGTGAGCAGGCAATTTAGAAGCCTAGAGGTGAGACT
GCAAAACCTTGAACGCCATGTAACATCTGATAACTTTGATTTAAAAAGACAAATCAATAGCTTGTAA

Upstream 100 bases:

>100_bases
CAGCTCAATGATTTGATTGCTAAAGCCGATAAGATGGCTGCGCGCATCGAAACCTTAGAGGCCATTCTGGATTCAGAATC
GCCTGAATGGAGGGGCAAAC

Downstream 100 bases:

>100_bases
TCCCTCTAAAGGGCGGCCATGTCCGCCCTTGTTGCTTAATCTCCCGTCAAATCCAGTGTATAGTTAACCTCATTCAACAT
TTAGGGACATCCTTATGGGA

Product: phage shock protein C, PspC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRGTSGRTMYRIPQSGKVAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALWVILDIKPQNSTVRDDIEVKK
KPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFDLKRQINSL

Sequences:

>Translated_128_residues
MRGTSGRTMYRIPQSGKVAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALWVILDIKPQNSTVRDDIEVKK
KPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFDLKRQINSL
>Mature_128_residues
MRGTSGRTMYRIPQSGKVAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALWVILDIKPQNSTVRDDIEVKK
KPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFDLKRQINSL

Specific function: The phage shock protein (psp) operon (pspABCDE) may play a significant role in the competition for survival under nutrient- or energy-limited conditions. PspC is involved in transcription regulation [H]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspC family [H]

Homologues:

Organism=Escherichia coli, GI1787564, Length=123, Percent_Identity=34.1463414634146, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007168
- InterPro:   IPR014320 [H]

Pfam domain/function: PF04024 PspC [H]

EC number: NA

Molecular weight: Translated: 14394; Mature: 14394

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGTSGRTMYRIPQSGKVAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALW
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VILDIKPQNSTVRDDIEVKKKPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFD
HHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LKRQINSL
HHHHHCCC
>Mature Secondary Structure
MRGTSGRTMYRIPQSGKVAGVCAGIAEYFAIETWLVRVLAVSIFLLGGSGVVFIIYVALW
CCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VILDIKPQNSTVRDDIEVKKKPWQSGEPAKQALSDVSRQFRSLEVRLQNLERHVTSDNFD
HHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
LKRQINSL
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]