| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is tolQ [C]
Identifier: 117921066
GI number: 117921066
Start: 3129056
End: 3130411
Strand: Reverse
Name: tolQ [C]
Synonym: Shewana3_2625
Alternate gene names: 117921066
Gene position: 3130411-3129056 (Counterclockwise)
Preceding gene: 117921067
Following gene: 117921065
Centisome position: 62.96
GC content: 44.47
Gene sequence:
>1356_bases ATGAAGAAGTTAATTACTACAGCTGTATTAGCTGCAAGTTTTTCTTTAACTGCTGGTATGGCTAGCGCTGCTGATGCGCC TAAGACCATCGATCAATTATTGCAGCAAGTTAAAGTTGATCGCGCTGCTGAAGGCAAAGTTAACAGCAAACGTGAACAAG AGTTCCAAGCTGAGCGTGGCGATAAAGCGGCTTTGTTAAAGCGTGAAAAAGATGCTTTAGCGGCTGAGAAGCAACGCGGT AAAGACCTAAACCAAGCTTTCTTAGACAACGAGCGTAAAATTGCTCAGTTAGAAGAAGACCTGAAAACTGCTCAAGGTGA CTTGGGTGAGATGTTCGGTGTGGTTAAAGGTGAAGCGGGCGATTTCGCTGGTAAATTAGCGAGCTCAAACGTCAGTGCTC AATACCCAAATCGCGATAAGTTCATCGCTGATTTAGGTGCGCGTAAGCAATTACCAAAAATCGAAGAGTTAGAGCAATTC TGGCAAGAACAATTATTCGAAATGGCACAATCTGGTAAGGTTGTTAAATTCGAAGGTTCTGTAACCGGTATCGACGGTAG CGTTAAAAACACCACGATTCACCGCATTGGTACTTACAACTTAACTGCTGATGGCAAGTATGTTGTTTACAACCCTGAAT TAGGTTTAATTCAAGAGTTATCACAACAGCCAGAAGGCTACCAAGTTAGTGCAGTAGGTAAGTGGGAACAAACTACTTCT GGTACTGCGCCATTCTACATCGACCCAGCTCGTGGCGTTCTGTTAAACATCTTCACTAACAAAGCAAGCTTTGAAGATCG TTTAGAAGCGGGTGGTACAATCGGTTACATCATTATCGCTCTGTTAGCATTAGGTCTGTTGATCTCTATCGAACGTTTAG TGACTATGACTATCATCGGCGCTCGTGTGAACAGCCAACGTAAGAACATTGATAAGCCAGGTAACAACGCCTTAGGTCGT ATCCTGAAAGTGTATCAAGAGAACAAAGACGTTGACGTTGAAACATTAGAGCTGAAACTTGACGAAGCGATTCTGAAAGA AACGCCAGCGTTAGAGTCTCGCATTTCAATCATCAAAGTTCTGGCTGCTATCGCACCTATGATGGGTCTGTTAGGTACAG TAACCGGTATGATTGCAACCTTCCAAAGTATCCAATTGTTCGGTACTGGCGATCCAAAACTGATGGCTGGCGGTATTTCT ATGGCGCTGATCACTACAGTTCAAGGTCTGGTTGCGGCTCTGCCTCTGATGTTAATGCACGCAGTTGTTGTTGCTCGTAG CAAGTCAATCGTGCAAGTTCTGGAAGAGCAAAGTGCTGGTATCATCGCAGCGCACGCTGAGAAGAGGGCTGACTAA
Upstream 100 bases:
>100_bases GCTATTTGCGTGAACTGACAAAAGGTATCCGCATTGCCCGTAAACAAGGCGCTCTAGATCTATTCGCGTTACCAATTCCT GCTGCGGAGACTGCACAATA
Downstream 100 bases:
>100_bases TGATGATTCACCTGATGGACATATGGGATTCCGTCAGGGGCTTCATGGCCTCCGGAGGCGACGTCCTCTGGTTAGTAGCG TTTGTGCTGTTCTTAATGTG
Product: MotA/TolQ/ExbB proton channel
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family Protein; NB System Biopolymer Transport Component; Biopolymer Transport ExbB Protein; Transporter MotA/lQ/ExbB Proton Channel Family Protein; NB System Transport; LQ Protein; Biopolymer Transport Proteins-Like; Outer Membrane Transport Energization Protein ExbB; Transporter Proton Channel Domain Containing Protein; Transporter MotA/lQ/ExbB Proton Channel Family; L Protein; ATPase; Biopolymer Transport Protein lR; Mota/lq/Exbb Proton Channel; Adventurous Gliding Motility Protein R; Biopolymer Transport Protein ExbB; Biopolymer Transport; MotA/lQ/ExbB Proton Channel Family Domain Protein; ExbB-Like Biopolymer Transport; Biopolymer Transport Protein ExbB-Related Protein; Ligand Gated Channel Protein lQ; Biopolymer Transport Proteinexbb-Related Protein; Transport Protein lQ; LOW QUALITY PROTEIN Biopolymer Transport ExbB Protein; MotA/lQ/ExbB Proton Channel Family; Biopolymer Transport Protein ExbB-Like Protein; Biopolymer Transport Protein ExbB-Like; L R/Q Protein; MotA/lQ/ExbB Proton Channel Protein
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKKLITTAVLAASFSLTAGMASAADAPKTIDQLLQQVKVDRAAEGKVNSKREQEFQAERGDKAALLKREKDALAAEKQRG KDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAGDFAGKLASSNVSAQYPNRDKFIADLGARKQLPKIEELEQF WQEQLFEMAQSGKVVKFEGSVTGIDGSVKNTTIHRIGTYNLTADGKYVVYNPELGLIQELSQQPEGYQVSAVGKWEQTTS GTAPFYIDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIGARVNSQRKNIDKPGNNALGR ILKVYQENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGIS MALITTVQGLVAALPLMLMHAVVVARSKSIVQVLEEQSAGIIAAHAEKRAD
Sequences:
>Translated_451_residues MKKLITTAVLAASFSLTAGMASAADAPKTIDQLLQQVKVDRAAEGKVNSKREQEFQAERGDKAALLKREKDALAAEKQRG KDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAGDFAGKLASSNVSAQYPNRDKFIADLGARKQLPKIEELEQF WQEQLFEMAQSGKVVKFEGSVTGIDGSVKNTTIHRIGTYNLTADGKYVVYNPELGLIQELSQQPEGYQVSAVGKWEQTTS GTAPFYIDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIGARVNSQRKNIDKPGNNALGR ILKVYQENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGIS MALITTVQGLVAALPLMLMHAVVVARSKSIVQVLEEQSAGIIAAHAEKRAD >Mature_451_residues MKKLITTAVLAASFSLTAGMASAADAPKTIDQLLQQVKVDRAAEGKVNSKREQEFQAERGDKAALLKREKDALAAEKQRG KDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAGDFAGKLASSNVSAQYPNRDKFIADLGARKQLPKIEELEQF WQEQLFEMAQSGKVVKFEGSVTGIDGSVKNTTIHRIGTYNLTADGKYVVYNPELGLIQELSQQPEGYQVSAVGKWEQTTS GTAPFYIDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIGARVNSQRKNIDKPGNNALGR ILKVYQENKDVDVETLELKLDEAILKETPALESRISIIKVLAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGIS MALITTVQGLVAALPLMLMHAVVVARSKSIVQVLEEQSAGIIAAHAEKRAD
Specific function: Involved In The Tonb-Independent Uptake Of Group A Colicins (Colicins A, E1, E2, E3, And K). [C]
COG id: COG0811
COG function: function code U; Biopolymer transport proteins
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48760; Mature: 48760
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLITTAVLAASFSLTAGMASAADAPKTIDQLLQQVKVDRAAEGKVNSKREQEFQAERG CCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHCC DKAALLKREKDALAAEKQRGKDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAG CHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DFAGKLASSNVSAQYPNRDKFIADLGARKQLPKIEELEQFWQEQLFEMAQSGKVVKFEGS HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC VTGIDGSVKNTTIHRIGTYNLTADGKYVVYNPELGLIQELSQQPEGYQVSAVGKWEQTTS EECCCCCCCCCEEEEEEEEEEECCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCC GTAPFYIDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIG CCCCEEECCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVNSQRKNIDKPGNNALGRILKVYQENKDVDVETLELKLDEAILKETPALESRISIIKV HHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHH LAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALITTVQGLVAALPLMLMH HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH AVVVARSKSIVQVLEEQSAGIIAAHAEKRAD HHHHHCCHHHHHHHHHCCCCEEEECCCCCCC >Mature Secondary Structure MKKLITTAVLAASFSLTAGMASAADAPKTIDQLLQQVKVDRAAEGKVNSKREQEFQAERG CCHHHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHCHHCCCCCCCHHHHHHHHHCC DKAALLKREKDALAAEKQRGKDLNQAFLDNERKIAQLEEDLKTAQGDLGEMFGVVKGEAG CHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCC DFAGKLASSNVSAQYPNRDKFIADLGARKQLPKIEELEQFWQEQLFEMAQSGKVVKFEGS HHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC VTGIDGSVKNTTIHRIGTYNLTADGKYVVYNPELGLIQELSQQPEGYQVSAVGKWEQTTS EECCCCCCCCCEEEEEEEEEEECCCEEEEECCCCHHHHHHHCCCCCEEEEEECCCCCCCC GTAPFYIDPARGVLLNIFTNKASFEDRLEAGGTIGYIIIALLALGLLISIERLVTMTIIG CCCCEEECCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARVNSQRKNIDKPGNNALGRILKVYQENKDVDVETLELKLDEAILKETPALESRISIIKV HHHCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHH LAAIAPMMGLLGTVTGMIATFQSIQLFGTGDPKLMAGGISMALITTVQGLVAALPLMLMH HHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEECCHHHHHHHHHHHHHHHHHHHHHH AVVVARSKSIVQVLEEQSAGIIAAHAEKRAD HHHHHCCHHHHHHHHHCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA