| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117921037
Identifier: 117921037
GI number: 117921037
Start: 3100650
End: 3101018
Strand: Direct
Name: 117921037
Synonym: Shewana3_2596
Alternate gene names: NA
Gene position: 3100650-3101018 (Clockwise)
Preceding gene: 117921036
Following gene: 117921039
Centisome position: 62.36
GC content: 48.51
Gene sequence:
>369_bases ATGACTCAATCAAATAACCCATTACACGGCATCACACTCGAAGCCATAGTCACCCAACTGGTGGAACACTATGGTTGGGA AGAACTCGGCGCGCGCATCAAAATCCGTTGTTTTACCGAAGATCCGAGTATCAAATCGAGTCTGCGCTTTTTAAGAAAAA CCGACTGGGCGCGGGAAAAAGTGGAATATTTGTATTTAAAAACCAATAAACTACCACTGCCAGGCGCAAAATCATCTAAC GCTCCGGCGAAAGCAGCGGCCAAGAAGCCTGCAAAACCCGCACAAAAACCTGCTCAGACGAATGCAGCCGCATCGACAAC TGCAACGGATGGCCAGATCAATAGCCATATCTGGGGCAAGCGCGACTAA
Upstream 100 bases:
>100_bases GAACGGACACTCATCAGTGTCCGTTTTTTTATCCATCGCCTTAAGCCTAAGCCCATAATGCTGGTATAATCCCGCCATTG TTCACGGCAGTTTATTCAAG
Downstream 100 bases:
>100_bases TTTCGCGAGAATATTCAAAAGCGCATTCACAAGAACAGACAAAAATGCGCGGGATAATTCACTCGATTATCCCGCGCATT ATTTTTTAAGTGGTTTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MTQSNNPLHGITLEAIVTQLVEHYGWEELGARIKIRCFTEDPSIKSSLRFLRKTDWAREKVEYLYLKTNKLPLPGAKSSN APAKAAAKKPAKPAQKPAQTNAAASTTATDGQINSHIWGKRD
Sequences:
>Translated_122_residues MTQSNNPLHGITLEAIVTQLVEHYGWEELGARIKIRCFTEDPSIKSSLRFLRKTDWAREKVEYLYLKTNKLPLPGAKSSN APAKAAAKKPAKPAQKPAQTNAAASTTATDGQINSHIWGKRD >Mature_121_residues TQSNNPLHGITLEAIVTQLVEHYGWEELGARIKIRCFTEDPSIKSSLRFLRKTDWAREKVEYLYLKTNKLPLPGAKSSNA PAKAAAKKPAKPAQKPAQTNAAASTTATDGQINSHIWGKRD
Specific function: Unknown
COG id: COG4628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13484; Mature: 13353
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQSNNPLHGITLEAIVTQLVEHYGWEELGARIKIRCFTEDPSIKSSLRFLRKTDWAREK CCCCCCCCCCEEHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH VEYLYLKTNKLPLPGAKSSNAPAKAAAKKPAKPAQKPAQTNAAASTTATDGQINSHIWGK EEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RD CC >Mature Secondary Structure TQSNNPLHGITLEAIVTQLVEHYGWEELGARIKIRCFTEDPSIKSSLRFLRKTDWAREK CCCCCCCCCEEHHHHHHHHHHHCCHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH VEYLYLKTNKLPLPGAKSSNAPAKAAAKKPAKPAQKPAQTNAAASTTATDGQINSHIWGK EEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA