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The map label for this gene is yehT [C]

Identifier: 117921035

GI number: 117921035

Start: 3098151

End: 3098861

Strand: Direct

Name: yehT [C]

Synonym: Shewana3_2594

Alternate gene names: 117921035

Gene position: 3098151-3098861 (Clockwise)

Preceding gene: 117921034

Following gene: 117921036

Centisome position: 62.31

GC content: 47.96

Gene sequence:

>711_bases
GTGATCACTTGTTTAATTGTCGACGATGAATTGTTTGCCCGCGAAGAGCTTGCCGATCTGCTCGGTCAAGAAGCTGATAT
TGAGATTATCGGCCAATGCTCCAATGCGATTGAGGCGCTGCAAACCATTGCCAAAGAAAAACCTCAATTGATTTTTCTCG
ACATCCAAATGCCGCGGATTTCCGGCATGGAGTTGATTGCCATGCTCGACCCCGACACTTTGCCAAAAATCGTGTTTGTG
ACTGCGTTCGATGAGTTTGCAGTCAAAGCCTTTGATAATCATGCCTTTGATTATCTGCTTAAACCCATAGATGCCGAACG
TCTCAGCCAAACCTTGAAACGAGTCCGTAAGGATCTGACGCCACAAGCCGTGAATCTGATCGCGCCATCGACGCTGGAGC
ATTTGCCCTGTTACAGCGGCAGTAAGTTAAAAGTCATCCCCATTCAAGATGTTGAATATGTATTTAGCGATTTAAGCGGT
ATCCATGTCGCCTGTACTAAGGGCAAGGTCCACACCCAGCTCACCCTGAAGGTATTAGAGGAAAAAACGCCGCTAGTGCG
TTGTCATCGTCAATATCTGATTTCGCCCAAGGCCATTGCCGAGATAGAACTGCTTGATACCGGCGCCGAAGTCACTACCC
TGCTTGGCGACAAAGTGCCCGTATCCCGCCGCTATCTCAAAAGCCTTAAGCAATTATTTGGCTTCCAATAG

Upstream 100 bases:

>100_bases
ACCTGTTTGGTGAGCAGTACGGCATTCAGGTGGAATGCGAGCCGGATGAGTACACCAAAGTCACTATCCGCTTACCCATA
GAACAGACGGAAACCAGCAC

Downstream 100 bases:

>100_bases
TCCGATTATTGACCGCTTATACTCATCTCCTAACCGCTCGGGACGGTTAATACTTATGAATGACATACGTATGCAACCGC
TCGCCCCATTCTATTACCGC

Product: putative two-component response-regulatory protein YehT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MITCLIVDDELFAREELADLLGQEADIEIIGQCSNAIEALQTIAKEKPQLIFLDIQMPRISGMELIAMLDPDTLPKIVFV
TAFDEFAVKAFDNHAFDYLLKPIDAERLSQTLKRVRKDLTPQAVNLIAPSTLEHLPCYSGSKLKVIPIQDVEYVFSDLSG
IHVACTKGKVHTQLTLKVLEEKTPLVRCHRQYLISPKAIAEIELLDTGAEVTTLLGDKVPVSRRYLKSLKQLFGFQ

Sequences:

>Translated_236_residues
MITCLIVDDELFAREELADLLGQEADIEIIGQCSNAIEALQTIAKEKPQLIFLDIQMPRISGMELIAMLDPDTLPKIVFV
TAFDEFAVKAFDNHAFDYLLKPIDAERLSQTLKRVRKDLTPQAVNLIAPSTLEHLPCYSGSKLKVIPIQDVEYVFSDLSG
IHVACTKGKVHTQLTLKVLEEKTPLVRCHRQYLISPKAIAEIELLDTGAEVTTLLGDKVPVSRRYLKSLKQLFGFQ
>Mature_236_residues
MITCLIVDDELFAREELADLLGQEADIEIIGQCSNAIEALQTIAKEKPQLIFLDIQMPRISGMELIAMLDPDTLPKIVFV
TAFDEFAVKAFDNHAFDYLLKPIDAERLSQTLKRVRKDLTPQAVNLIAPSTLEHLPCYSGSKLKVIPIQDVEYVFSDLSG
IHVACTKGKVHTQLTLKVLEEKTPLVRCHRQYLISPKAIAEIELLDTGAEVTTLLGDKVPVSRRYLKSLKQLFGFQ

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=239, Percent_Identity=51.8828451882845, Blast_Score=248, Evalue=2e-67,
Organism=Escherichia coli, GI1788724, Length=241, Percent_Identity=28.2157676348548, Blast_Score=100, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26448; Mature: 26448

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITCLIVDDELFAREELADLLGQEADIEIIGQCSNAIEALQTIAKEKPQLIFLDIQMPRI
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDAERLSQTLKRVRKDLT
CCCEEEEEECCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCC
PQAVNLIAPSTLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTLKVLE
HHHHHHCCCCHHHHCCCCCCCEEEEEECCHHHHHHHCCCCEEEEEECCCEEHHHHHHHHH
EKTPLVRCHRQYLISPKAIAEIELLDTGAEVTTLLGDKVPVSRRYLKSLKQLFGFQ
CCCHHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MITCLIVDDELFAREELADLLGQEADIEIIGQCSNAIEALQTIAKEKPQLIFLDIQMPRI
CEEEEEECCHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCEEEEEEECCCC
SGMELIAMLDPDTLPKIVFVTAFDEFAVKAFDNHAFDYLLKPIDAERLSQTLKRVRKDLT
CCCEEEEEECCCCCCCEEEEEEHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCC
PQAVNLIAPSTLEHLPCYSGSKLKVIPIQDVEYVFSDLSGIHVACTKGKVHTQLTLKVLE
HHHHHHCCCCHHHHCCCCCCCEEEEEECCHHHHHHHCCCCEEEEEECCCEEHHHHHHHHH
EKTPLVRCHRQYLISPKAIAEIELLDTGAEVTTLLGDKVPVSRRYLKSLKQLFGFQ
CCCHHHHHHHHHHCCCHHHEEEEEECCCCHHHHHHCCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]