| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
Click here to switch to the map view.
The map label for this gene is 117921029
Identifier: 117921029
GI number: 117921029
Start: 3093869
End: 3094273
Strand: Direct
Name: 117921029
Synonym: Shewana3_2588
Alternate gene names: NA
Gene position: 3093869-3094273 (Clockwise)
Preceding gene: 117921028
Following gene: 117921030
Centisome position: 62.22
GC content: 46.42
Gene sequence:
>405_bases ATGCCATTTTATCGTCAATACGGTGCCAAGGGCTTAAAAGCCGTTGAGCATCTGGTATTAATCATCATCGCCATTGCGAC CGTTGTCGCCATCGGTCAAGAAATTGTTCATGTCTTTAATGTCGGCGCCGTAGCGCTTGCCGATCTACTGTTATTGTTTA TTTACCTTGAAGTGCTCGCCATGGTGGCCAACTACGCCGAATCGGGCAAATTACCCGTGCGTATGCCGCTGTACATTGCG ATTGTCGCCCTAGCGCGGTACTTAATCTTAGATATGAAGAGTATGGATGACTGGCGCATTGCCGCCATTTCACTCTCGAC TTTGATTTTAGCGGCGACGGTTATCGTTATCCGTTGGGGCCAATTAAAAATGCCCTACCCTAAAAATCAAGAATACGATA ATTAA
Upstream 100 bases:
>100_bases TGTTATCTTGTGAATTGAGTCACAGAGAATCACGCCTCTTTTCCCTACCTAAGGTATTTTTACTGTTACTATTTATAAAA ATATTCAGTAGGGAGTACCT
Downstream 100 bases:
>100_bases CCTTCCTGCGCGCCATTGCCAGCCAAAGGCAATGGCGCGATGTTCTTGCCAGTAAAATCCCCACCAAAGACCTCGCTTTC ACATTGGTATTCTGCCAAAA
Product: phosphate-starvation-inducible E
Products: NA
Alternate protein names: Protein PsiE
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MPFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLAMVANYAESGKLPVRMPLYIA IVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN
Sequences:
>Translated_134_residues MPFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLAMVANYAESGKLPVRMPLYIA IVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN >Mature_133_residues PFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLAMVANYAESGKLPVRMPLYIAI VALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN
Specific function: Unknown
COG id: COG3223
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14933; Mature: 14802
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLA CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVANYAESGKLPVRMPLYIAIVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC QLKMPYPKNQEYDN CCCCCCCCCCCCCC >Mature Secondary Structure PFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLA CCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVANYAESGKLPVRMPLYIAIVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC QLKMPYPKNQEYDN CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA