The gene/protein map for NC_008577 is currently unavailable.
Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

Click here to switch to the map view.

The map label for this gene is 117921029

Identifier: 117921029

GI number: 117921029

Start: 3093869

End: 3094273

Strand: Direct

Name: 117921029

Synonym: Shewana3_2588

Alternate gene names: NA

Gene position: 3093869-3094273 (Clockwise)

Preceding gene: 117921028

Following gene: 117921030

Centisome position: 62.22

GC content: 46.42

Gene sequence:

>405_bases
ATGCCATTTTATCGTCAATACGGTGCCAAGGGCTTAAAAGCCGTTGAGCATCTGGTATTAATCATCATCGCCATTGCGAC
CGTTGTCGCCATCGGTCAAGAAATTGTTCATGTCTTTAATGTCGGCGCCGTAGCGCTTGCCGATCTACTGTTATTGTTTA
TTTACCTTGAAGTGCTCGCCATGGTGGCCAACTACGCCGAATCGGGCAAATTACCCGTGCGTATGCCGCTGTACATTGCG
ATTGTCGCCCTAGCGCGGTACTTAATCTTAGATATGAAGAGTATGGATGACTGGCGCATTGCCGCCATTTCACTCTCGAC
TTTGATTTTAGCGGCGACGGTTATCGTTATCCGTTGGGGCCAATTAAAAATGCCCTACCCTAAAAATCAAGAATACGATA
ATTAA

Upstream 100 bases:

>100_bases
TGTTATCTTGTGAATTGAGTCACAGAGAATCACGCCTCTTTTCCCTACCTAAGGTATTTTTACTGTTACTATTTATAAAA
ATATTCAGTAGGGAGTACCT

Downstream 100 bases:

>100_bases
CCTTCCTGCGCGCCATTGCCAGCCAAAGGCAATGGCGCGATGTTCTTGCCAGTAAAATCCCCACCAAAGACCTCGCTTTC
ACATTGGTATTCTGCCAAAA

Product: phosphate-starvation-inducible E

Products: NA

Alternate protein names: Protein PsiE

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MPFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLAMVANYAESGKLPVRMPLYIA
IVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN

Sequences:

>Translated_134_residues
MPFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLAMVANYAESGKLPVRMPLYIA
IVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN
>Mature_133_residues
PFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLAMVANYAESGKLPVRMPLYIAI
VALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWGQLKMPYPKNQEYDN

Specific function: Unknown

COG id: COG3223

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14933; Mature: 14802

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLA
CCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVANYAESGKLPVRMPLYIAIVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
QLKMPYPKNQEYDN
CCCCCCCCCCCCCC
>Mature Secondary Structure 
PFYRQYGAKGLKAVEHLVLIIIAIATVVAIGQEIVHVFNVGAVALADLLLLFIYLEVLA
CCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVANYAESGKLPVRMPLYIAIVALARYLILDMKSMDDWRIAAISLSTLILAATVIVIRWG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
QLKMPYPKNQEYDN
CCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA