Click here to switch to the map view.

The map label for this gene is 117921027

Identifier: 117921027

GI number: 117921027

Start: 3091631

End: 3092140

Strand: Direct

Name: 117921027

Synonym: Shewana3_2586

Alternate gene names: NA

Gene position: 3091631-3092140 (Clockwise)

Preceding gene: 117921022

Following gene: 117921028

Centisome position: 62.18

GC content: 47.06

Gene sequence:

>510_bases
ATGCCAAAAAAATTAATCAAAAAATATATGCCTAAGCCTGAAACCCTGCGTGAGCACAAACACCTACGCATTTTCGGTCG
CTTATTACATAACCCCAATCTGTGGGCGCTTAATCGCCGCTCTGCCCCGGGGGCCTTTGCCATAGGTTTGTTTGTCGCTT
GGATCCCAATGCCGTTTCAAATGGTGGTCGCCGCCGCTTTCGCCATCCTGTTTAATGTCAATATTCCTGTCTCTGTCGCA
TTAGTGTGGATCACCAACCCGCTCACCATGCCGGTAATGTTTTATGGCGCTTATTTATTAGGTGCAAAAATTCTTGGGCA
TGCGCCGCAGGAGTTTGCCTTTGAAGCCAGCTGGCAGTGGATTGAGTCTTCATTGGCCACCATTGGCCCCGCATTTTTGC
TTGGTTGCTTAGTGTTAGGGGTGATATTTTCCGCCTTGGGATACCTGACGATCAGTAACCTGTGGAAATACTCCATCATG
TTTAAATGGCAAAAGCGTAAGACAAAATAA

Upstream 100 bases:

>100_bases
GGCAGCAGCGAGGGCCACAACATCGCTGATAATAAGGTGGCACTAAAGCCAAAAATGAATCCATTCATAGTGAATTAAGT
TAAGACAGCAATTTCAGCCT

Downstream 100 bases:

>100_bases
TTGCCGCATCTTTGCCACACCATCCCATAGCTCACCAGGATTGTATCTAAACGCATCCAATAGCATCTAAGCACTTTGAT
TAGCGCTTAGATGTCTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPKKLIKKYMPKPETLREHKHLRIFGRLLHNPNLWALNRRSAPGAFAIGLFVAWIPMPFQMVVAAAFAILFNVNIPVSVA
LVWITNPLTMPVMFYGAYLLGAKILGHAPQEFAFEASWQWIESSLATIGPAFLLGCLVLGVIFSALGYLTISNLWKYSIM
FKWQKRKTK

Sequences:

>Translated_169_residues
MPKKLIKKYMPKPETLREHKHLRIFGRLLHNPNLWALNRRSAPGAFAIGLFVAWIPMPFQMVVAAAFAILFNVNIPVSVA
LVWITNPLTMPVMFYGAYLLGAKILGHAPQEFAFEASWQWIESSLATIGPAFLLGCLVLGVIFSALGYLTISNLWKYSIM
FKWQKRKTK
>Mature_168_residues
PKKLIKKYMPKPETLREHKHLRIFGRLLHNPNLWALNRRSAPGAFAIGLFVAWIPMPFQMVVAAAFAILFNVNIPVSVAL
VWITNPLTMPVMFYGAYLLGAKILGHAPQEFAFEASWQWIESSLATIGPAFLLGCLVLGVIFSALGYLTISNLWKYSIMF
KWQKRKTK

Specific function: Unknown

COG id: COG3216

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19176; Mature: 19045

Theoretical pI: Translated: 10.88; Mature: 10.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKKLIKKYMPKPETLREHKHLRIFGRLLHNPNLWALNRRSAPGAFAIGLFVAWIPMPFQ
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHH
MVVAAAFAILFNVNIPVSVALVWITNPLTMPVMFYGAYLLGAKILGHAPQEFAFEASWQW
HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IESSLATIGPAFLLGCLVLGVIFSALGYLTISNLWKYSIMFKWQKRKTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC
>Mature Secondary Structure 
PKKLIKKYMPKPETLREHKHLRIFGRLLHNPNLWALNRRSAPGAFAIGLFVAWIPMPFQ
CHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCHH
MVVAAAFAILFNVNIPVSVALVWITNPLTMPVMFYGAYLLGAKILGHAPQEFAFEASWQW
HHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
IESSLATIGPAFLLGCLVLGVIFSALGYLTISNLWKYSIMFKWQKRKTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA