Click here to switch to the map view.

The map label for this gene is ycaI [H]

Identifier: 117921026

GI number: 117921026

Start: 3089277

End: 3091598

Strand: Reverse

Name: ycaI [H]

Synonym: Shewana3_2585

Alternate gene names: 117921026

Gene position: 3091598-3089277 (Counterclockwise)

Preceding gene: 117921033

Following gene: 117921025

Centisome position: 62.18

GC content: 48.02

Gene sequence:

>2322_bases
ATGAATGGATTCATTTTTGGCTTTAGTGCCACCTTATTATCAGCGATGTTGTGGCCCTCGCTGCTGCCAATTAATTCTTT
ACCCTACCTTTGCCTTGGGGCACTCATCTTATTCAAAAAAGCGCCGAGTTTGTCTGGCATACTCTTCGCGATGTGTTGGC
TTACAGGGTTTTGCTTAGTCTTATCTCGGCAGGATCTTCCTTTATCGCAACAGCCAATTCAAGTGAGGGCCGAAATCATA
TCACTAGTTAGTCAAAACAGCGACTGGGTTAGCTTCGATATTATTGTCGATAAACCAAATTTAATCTTTTGGCCAAGGGC
GAAGTTGCGACTCACTTGGCAATCTCCCGAAGCGGTGCAAGTGGGGCAAGTTTGGTCATTTACGCTGATGCCTAAAACTA
TCTCGAGCGTGTTAAATCAAGGTGGCTACAACGAACAAAAGCAATTGATTAGTCAGCATATTGTTGGCAAGGGCAGGGTA
CTACATGCAACGTTAGAAACATCGCATTTTTCATTAAGAAATCATCTGATTAGCCAATTGTCCCCTAAGCTGCCGACATT
CGAGCAGGGGGATATTTTGCTCGCGCTGATTTTAGGCGATAAGCAACTTATACCCGCCAGTAAGTGGCAGGCATTAAGGC
AAACGGGAACCGGGCATTTAGTGGCGATATCTGGGCTGCATTTATCTGTGATCACCGCCTGGGTTTATGTATGCACGCTG
TTTCTATTAAGCCGCTTCGCGGCGCATCCGAGCAGGCGTAATCTAGTGATTGCGCTATTGCTTGCCGGTGGTTGTGCTTT
ATTTTATAGCTATTTAGCGGGATTTGCCGTTTCGACCCAACGCGCGTTAGTGATGATTTTATTGATCATGCTGCTGAGTT
TATTAAGGCGCTATTCGAGTGCGTGGGACCGTTTACTGTTTGCACTCTTTATTGTGCTTTTGCTCGATCCGCTTGCCTGT
TTGAGTGCAGGTTTTTGGCTGTCGTTTTGCGCCTTGGCGATTATTTTATATACCTTGGAAAGCGCGCCGCGTATTCAGCC
CGTTGAAGGTAACGCCACCTTTAGGGCAAAAGCGAGAGGGAGACTCGCGCAATTTTGGTCAATTCAATGGCGTTTAAGTT
TGGTGTTAGGGCTGGTACAGGCGGTGTTTTTCGGCGGCCTAAGCGTACACAGTCTGTGGATGAATATGCTGGTGGTGCCT
TGGTTTAGCTTAATCGTTATCCCCTTGTCTATGCTGGCGTTTATCCTCTGGTGGGTAGGCACTCTTTTGGGGCAAGCATG
GTTTGCGTTGTTCCATCTGGCTGATTTAACACTGTTACCCTATGGCAAGTTATTGGAACTTAGTGGTGATTTACCCGCCC
ATTGGCATTCGGTCTCTGAGACCTTGCTCGGGGCCAGTCTGTGCGCACTGTTGGCCTTGATACTGTGGCGTTACCTTCCG
CATCATAGTCGGTATGGGCTCTGGCATTTACCTTTAGCCTTGCTGTTTATTCCGTTCATATTAGTGATTTTTCCACGTGT
GACTGAGTCCTCTTCCCCTCAGTGGACACTGCATCTACTCGATGTGGGGCAGGGATTAGCCGTGGTGATTGAACAGGATA
AACGCGCACTTATCTATGATACGGGCGCCGCCTTTGGTGAAGATTTTAGCTATAGCGAACGGGTGGTCATTCCGTTTCTT
AACAGCAAAGGCTTAGCTCAGGTGGATTATATTGTCGTGAGTCATAGGGATAACGACCATGCAGGTGGTGCCGAAGTACT
GGCTAAAGCCTATCCAAGGGCAAACTGGATAACCGATGTGGCTCATTTGGCTGGTATGCCTTGTGTGCCGCAGCAAATTC
AGTGGCAGCAATTAACGTTAAACTTTATTTCGCCGCAGACGGCCAAGGGAGGGAACAACGCCTCCTGTGTGCTGCGTATC
GATGATGGCGCGCACAGTTTGTTACTCAGTGGTGATATTGAAAAGGAAACCGAAGCGGTATTGATTGAACAAGCGCTCAA
AGGTGCCGAGCTTAAAAGCCAAGTGCTCATTGCGCCGCACCATGGCAGCCGCACCTCATCAACCCCTGCCTTTATCGATG
CTGTCGCTCCTGAGTTAGTGTTGTTTCCTTCAGGTCTCAATAACCGTTATGGTTTCCCCAAGCCCGATGTGGTTGCGCGC
TATCAAGCGCGGAATATTCAGTATTTAACGACGGGGCGAGAAGGGCAAATCAGCGTTTCTTTTAATGCTGGACGGCTTGA
GGTGAAGACCTATCGGCGTGATTTGGCGCCATTTTGGTATAACCGCTTGTTTAGATTTGGTGACTTGATTAATCCAGAGT
AG

Upstream 100 bases:

>100_bases
CGTAGGTGTTTGTGCTCACGCAGGGTTTCAGGCTTAGGCATATATTTTTTGATTAATTTTTTTGGCATAGGCTGAAATTG
CTGTCTTAACTTAATTCACT

Downstream 100 bases:

>100_bases
AATGGCCACTTTGCCATAATTTAGTGTTTTCAATGACAGCATCTCCTAAAGACGAAATGTGGAAAGTTTTCAAACGATTA
CTGGGCTACCTCAAACCGAT

Product: DNA internalization-related competence protein ComEC/Rec2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MNGFIFGFSATLLSAMLWPSLLPINSLPYLCLGALILFKKAPSLSGILFAMCWLTGFCLVLSRQDLPLSQQPIQVRAEII
SLVSQNSDWVSFDIIVDKPNLIFWPRAKLRLTWQSPEAVQVGQVWSFTLMPKTISSVLNQGGYNEQKQLISQHIVGKGRV
LHATLETSHFSLRNHLISQLSPKLPTFEQGDILLALILGDKQLIPASKWQALRQTGTGHLVAISGLHLSVITAWVYVCTL
FLLSRFAAHPSRRNLVIALLLAGGCALFYSYLAGFAVSTQRALVMILLIMLLSLLRRYSSAWDRLLFALFIVLLLDPLAC
LSAGFWLSFCALAIILYTLESAPRIQPVEGNATFRAKARGRLAQFWSIQWRLSLVLGLVQAVFFGGLSVHSLWMNMLVVP
WFSLIVIPLSMLAFILWWVGTLLGQAWFALFHLADLTLLPYGKLLELSGDLPAHWHSVSETLLGASLCALLALILWRYLP
HHSRYGLWHLPLALLFIPFILVIFPRVTESSSPQWTLHLLDVGQGLAVVIEQDKRALIYDTGAAFGEDFSYSERVVIPFL
NSKGLAQVDYIVVSHRDNDHAGGAEVLAKAYPRANWITDVAHLAGMPCVPQQIQWQQLTLNFISPQTAKGGNNASCVLRI
DDGAHSLLLSGDIEKETEAVLIEQALKGAELKSQVLIAPHHGSRTSSTPAFIDAVAPELVLFPSGLNNRYGFPKPDVVAR
YQARNIQYLTTGREGQISVSFNAGRLEVKTYRRDLAPFWYNRLFRFGDLINPE

Sequences:

>Translated_773_residues
MNGFIFGFSATLLSAMLWPSLLPINSLPYLCLGALILFKKAPSLSGILFAMCWLTGFCLVLSRQDLPLSQQPIQVRAEII
SLVSQNSDWVSFDIIVDKPNLIFWPRAKLRLTWQSPEAVQVGQVWSFTLMPKTISSVLNQGGYNEQKQLISQHIVGKGRV
LHATLETSHFSLRNHLISQLSPKLPTFEQGDILLALILGDKQLIPASKWQALRQTGTGHLVAISGLHLSVITAWVYVCTL
FLLSRFAAHPSRRNLVIALLLAGGCALFYSYLAGFAVSTQRALVMILLIMLLSLLRRYSSAWDRLLFALFIVLLLDPLAC
LSAGFWLSFCALAIILYTLESAPRIQPVEGNATFRAKARGRLAQFWSIQWRLSLVLGLVQAVFFGGLSVHSLWMNMLVVP
WFSLIVIPLSMLAFILWWVGTLLGQAWFALFHLADLTLLPYGKLLELSGDLPAHWHSVSETLLGASLCALLALILWRYLP
HHSRYGLWHLPLALLFIPFILVIFPRVTESSSPQWTLHLLDVGQGLAVVIEQDKRALIYDTGAAFGEDFSYSERVVIPFL
NSKGLAQVDYIVVSHRDNDHAGGAEVLAKAYPRANWITDVAHLAGMPCVPQQIQWQQLTLNFISPQTAKGGNNASCVLRI
DDGAHSLLLSGDIEKETEAVLIEQALKGAELKSQVLIAPHHGSRTSSTPAFIDAVAPELVLFPSGLNNRYGFPKPDVVAR
YQARNIQYLTTGREGQISVSFNAGRLEVKTYRRDLAPFWYNRLFRFGDLINPE
>Mature_773_residues
MNGFIFGFSATLLSAMLWPSLLPINSLPYLCLGALILFKKAPSLSGILFAMCWLTGFCLVLSRQDLPLSQQPIQVRAEII
SLVSQNSDWVSFDIIVDKPNLIFWPRAKLRLTWQSPEAVQVGQVWSFTLMPKTISSVLNQGGYNEQKQLISQHIVGKGRV
LHATLETSHFSLRNHLISQLSPKLPTFEQGDILLALILGDKQLIPASKWQALRQTGTGHLVAISGLHLSVITAWVYVCTL
FLLSRFAAHPSRRNLVIALLLAGGCALFYSYLAGFAVSTQRALVMILLIMLLSLLRRYSSAWDRLLFALFIVLLLDPLAC
LSAGFWLSFCALAIILYTLESAPRIQPVEGNATFRAKARGRLAQFWSIQWRLSLVLGLVQAVFFGGLSVHSLWMNMLVVP
WFSLIVIPLSMLAFILWWVGTLLGQAWFALFHLADLTLLPYGKLLELSGDLPAHWHSVSETLLGASLCALLALILWRYLP
HHSRYGLWHLPLALLFIPFILVIFPRVTESSSPQWTLHLLDVGQGLAVVIEQDKRALIYDTGAAFGEDFSYSERVVIPFL
NSKGLAQVDYIVVSHRDNDHAGGAEVLAKAYPRANWITDVAHLAGMPCVPQQIQWQQLTLNFISPQTAKGGNNASCVLRI
DDGAHSLLLSGDIEKETEAVLIEQALKGAELKSQVLIAPHHGSRTSSTPAFIDAVAPELVLFPSGLNNRYGFPKPDVVAR
YQARNIQYLTTGREGQISVSFNAGRLEVKTYRRDLAPFWYNRLFRFGDLINPE

Specific function: Unknown

COG id: COG2333

COG function: function code R; Predicted hydrolase (metallo-beta-lactamase superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ComEC, N.gonorrhoeae ComA, and H.influenzae Rec2 [H]

Homologues:

Organism=Escherichia coli, GI87081801, Length=663, Percent_Identity=30.920060331825, Blast_Score=277, Evalue=2e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR004477
- InterPro:   IPR004797 [H]

Pfam domain/function: PF03772 Competence; PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 86031; Mature: 86031

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGFIFGFSATLLSAMLWPSLLPINSLPYLCLGALILFKKAPSLSGILFAMCWLTGFCLV
CCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LSRQDLPLSQQPIQVRAEIISLVSQNSDWVSFDIIVDKPNLIFWPRAKLRLTWQSPEAVQ
HCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCEEEEEECCCCCEE
VGQVWSFTLMPKTISSVLNQGGYNEQKQLISQHIVGKGRVLHATLETSHFSLRNHLISQL
ECCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHH
SPKLPTFEQGDILLALILGDKQLIPASKWQALRQTGTGHLVAISGLHLSVITAWVYVCTL
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH
FLLSRFAAHPSRRNLVIALLLAGGCALFYSYLAGFAVSTQRALVMILLIMLLSLLRRYSS
HHHHHHHCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWDRLLFALFIVLLLDPLACLSAGFWLSFCALAIILYTLESAPRIQPVEGNATFRAKARG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEHHCC
RLAQFWSIQWRLSLVLGLVQAVFFGGLSVHSLWMNMLVVPWFSLIVIPLSMLAFILWWVG
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLGQAWFALFHLADLTLLPYGKLLELSGDLPAHWHSVSETLLGASLCALLALILWRYLP
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HHSRYGLWHLPLALLFIPFILVIFPRVTESSSPQWTLHLLDVGQGLAVVIEQDKRALIYD
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEE
TGAAFGEDFSYSERVVIPFLNSKGLAQVDYIVVSHRDNDHAGGAEVLAKAYPRANWITDV
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHH
AHLAGMPCVPQQIQWQQLTLNFISPQTAKGGNNASCVLRIDDGAHSLLLSGDIEKETEAV
HHHCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHH
LIEQALKGAELKSQVLIAPHHGSRTSSTPAFIDAVAPELVLFPSGLNNRYGFPKPDVVAR
HHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHH
YQARNIQYLTTGREGQISVSFNAGRLEVKTYRRDLAPFWYNRLFRFGDLINPE
HHHCCEEEEECCCCCEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNGFIFGFSATLLSAMLWPSLLPINSLPYLCLGALILFKKAPSLSGILFAMCWLTGFCLV
CCCEEEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LSRQDLPLSQQPIQVRAEIISLVSQNSDWVSFDIIVDKPNLIFWPRAKLRLTWQSPEAVQ
HCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEECCCEEEEEECCCCCEE
VGQVWSFTLMPKTISSVLNQGGYNEQKQLISQHIVGKGRVLHATLETSHFSLRNHLISQL
ECCEEEEEECHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHH
SPKLPTFEQGDILLALILGDKQLIPASKWQALRQTGTGHLVAISGLHLSVITAWVYVCTL
CCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHH
FLLSRFAAHPSRRNLVIALLLAGGCALFYSYLAGFAVSTQRALVMILLIMLLSLLRRYSS
HHHHHHHCCCCCCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AWDRLLFALFIVLLLDPLACLSAGFWLSFCALAIILYTLESAPRIQPVEGNATFRAKARG
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEHHCC
RLAQFWSIQWRLSLVLGLVQAVFFGGLSVHSLWMNMLVVPWFSLIVIPLSMLAFILWWVG
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TLLGQAWFALFHLADLTLLPYGKLLELSGDLPAHWHSVSETLLGASLCALLALILWRYLP
HHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
HHSRYGLWHLPLALLFIPFILVIFPRVTESSSPQWTLHLLDVGQGLAVVIEQDKRALIYD
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEE
TGAAFGEDFSYSERVVIPFLNSKGLAQVDYIVVSHRDNDHAGGAEVLAKAYPRANWITDV
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCHHHHHH
AHLAGMPCVPQQIQWQQLTLNFISPQTAKGGNNASCVLRIDDGAHSLLLSGDIEKETEAV
HHHCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCEEEEEECCCCCEEEEECCCCHHHHHH
LIEQALKGAELKSQVLIAPHHGSRTSSTPAFIDAVAPELVLFPSGLNNRYGFPKPDVVAR
HHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHH
YQARNIQYLTTGREGQISVSFNAGRLEVKTYRRDLAPFWYNRLFRFGDLINPE
HHHCCEEEEECCCCCEEEEEECCCEEEHHHHHHHCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8094880 [H]