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The map label for this gene is tolQ [H]

Identifier: 117920975

GI number: 117920975

Start: 3030329

End: 3031015

Strand: Reverse

Name: tolQ [H]

Synonym: Shewana3_2534

Alternate gene names: 117920975

Gene position: 3031015-3030329 (Counterclockwise)

Preceding gene: 117920976

Following gene: 117920974

Centisome position: 60.96

GC content: 41.92

Gene sequence:

>687_bases
GTGCAAGCTGATATGTCGATTGTTGGGTTATTTTTACAAGCCAGTTTATTAGTGAAATTTGTGATGTTCACTTTACTTTG
CTTGTCTGTGATGTCTTGGACGGTGATTTTACAACGCCGTAGCTTATTGACATCTGCAAAAAGTAAATCGGCAAAATTTG
AAGATAAATTTTGGTCAGGCGTTGATTTAAATCGTTTGTATAAAGAATTATCGGCTCGTCCAGATAATACTGGCTTAGAG
TCATTATTTGTGACGGGTTTTAAAGAATATTCTCGTCTAAATAAATTAAATAGCAAAGTGCCCGATGCGGTGATGGATGG
GACTTCACGTGCCATGCGCGTCACCTTATCCCGTGAGTTAGAAAAGTTAGAAGCAAACTTACCTTTATTGGCAACCATTG
GTTCGACTAGCCCTTATATCGGTTTGTTTGGTACGGTATGGGGTATTATGAATTCATTTATCGCTATCGGATCAATGGAG
AACGCGACGCTTGCCATGGTGGCGCCAGGTATTGCAGAAGCTCTGATTGCAACCGCAATGGGTCTGTTTGCGGCAATCCC
TGCTGTTATCGCTTACAACCGTTTTGCCACCCAAGTTGAAAAGCTTGAAATCGGTTACGCTAACTTTATGGAAGAGTTCT
CTAGCATCCTGCATCGCCAAGCGTACAGTGAGAAGGAAGGCGTATAA

Upstream 100 bases:

>100_bases
GGAGACTGTTATTGTGAAGGTACAGTGCTAGTGGCCTGTGTTGCCTTATCACGAATGCGGCCCCGAGCTATTCCCTTAAA
TATTGTGCAGGAGTTTGACA

Downstream 100 bases:

>100_bases
TGCAAGTCGGTTATCAGCGTAAACGTCGTCGCCCCGTTGCCGAAATCAACGTGGTGCCTTATATCGACGTCATGCTCGTG
CTGCTGATTATTTTCATGGT

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDLNRLYKELSARPDNTGLE
SLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSME
NATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQAYSEKEGV

Sequences:

>Translated_228_residues
MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDLNRLYKELSARPDNTGLE
SLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSME
NATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQAYSEKEGV
>Mature_228_residues
MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSGVDLNRLYKELSARPDNTGLE
SLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSRELEKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSME
NATLAMVAPGIAEALIATAMGLFAAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQAYSEKEGV

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1786958, Length=224, Percent_Identity=60.2678571428571, Blast_Score=286, Evalue=1e-78,
Organism=Escherichia coli, GI1789381, Length=222, Percent_Identity=37.3873873873874, Blast_Score=123, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898
- InterPro:   IPR014163 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 25105; Mature: 25105

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
VDLNRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREL
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
EKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAM
HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHH
GLFAAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQAYSEKEGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQADMSIVGLFLQASLLVKFVMFTLLCLSVMSWTVILQRRSLLTSAKSKSAKFEDKFWSG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
VDLNRLYKELSARPDNTGLESLFVTGFKEYSRLNKLNSKVPDAVMDGTSRAMRVTLSREL
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH
EKLEANLPLLATIGSTSPYIGLFGTVWGIMNSFIAIGSMENATLAMVAPGIAEALIATAM
HHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHHHH
GLFAAIPAVIAYNRFATQVEKLEIGYANFMEEFSSILHRQAYSEKEGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]