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The map label for this gene is 117920916

Identifier: 117920916

GI number: 117920916

Start: 2959864

End: 2960595

Strand: Reverse

Name: 117920916

Synonym: Shewana3_2473

Alternate gene names: NA

Gene position: 2960595-2959864 (Counterclockwise)

Preceding gene: 117920918

Following gene: 117920915

Centisome position: 59.54

GC content: 47.13

Gene sequence:

>732_bases
ATGCTCTGTTGCCTTTTCGCCACGGTCAATAGCGCATTTTCCGATACGCTTAAGCTCACTTCATTACTCTGGCCGCCTTA
TTCCGGTCAGCAACTGGCACAACAAGGGGCCAGTGTCGCGGTCGCTCAAGCCGCCTTTGAACGTATGGAACAGCAACTGG
TTGTGGATTTTTACCCTTGGAGCCGGGCGATAAAATTGGCGGCTATGCCAAGCTCCGATTACATTGGTTATTTTCCAGAA
TATTATTTTGAAACGGACAAATTTGTTTTTTCAAAACCAATAGGGATCAGTCCATTAGGCATTGTTGAGCAAAAATCACA
TCCCATCAGCTGGCACTACTTAGCTGATCTGAACCGCTATACCTTAGGGGTGGTGAAGGACTATGTGAATACTGAATCCC
TAGATCTGATGATTGCTTCCGGTACACAGCCCGTCGAGGCTGTGACCTCCGATGAACAAAACATCAAGAAGGTGGCAGCC
GGTCGCATCGATGGTGCAGTGATAGATGTCAACGTACTCTATTACCTGTTAAAGCAGCCTCATCTCCAGCCATTGGCGGA
TAAATTACAGGTGAATAAACAACTGCTTGCCAATAAACAGCTGTATATTGCGTTTCGTAATACCGAGGAGGGGCGCCATT
GGCGAGATGTTTTCGACCAAGGCTTAGCTCAACTGGATATTGAGAGCATTATGGGGGAGTTGTTGTTTCAGGAGGAAGTG
ACACGCCACTAA

Upstream 100 bases:

>100_bases
AAGAGTTTAACCGATGAGCATGTGATGAATTGTTTGTTTTTCAAGCCATTAAAACAGATGATCCTTTGATGGAGGTGTTA
TGTTCCGCTGGTGCCTACTG

Downstream 100 bases:

>100_bases
AGTGAACTTGGCTCTGGCTGAATCTGTTGTCATAAATGTGTCGTGGTTCGCCATTAACATCGTCCTAAGGCTATGAGTCG
ATGCTCATTTCACTTTCTAG

Product: succinate dehydrogenase (ubiquinone)

Products: NA

Alternate protein names: Amino Acid ABC Transporter Periplasmic Protein; Succinate Dehydrogenase; ABC-Type Amino Acid Transport Periplasmic Protein; ABC-Type Transporter Periplasmic Component

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLCCLFATVNSAFSDTLKLTSLLWPPYSGQQLAQQGASVAVAQAAFERMEQQLVVDFYPWSRAIKLAAMPSSDYIGYFPE
YYFETDKFVFSKPIGISPLGIVEQKSHPISWHYLADLNRYTLGVVKDYVNTESLDLMIASGTQPVEAVTSDEQNIKKVAA
GRIDGAVIDVNVLYYLLKQPHLQPLADKLQVNKQLLANKQLYIAFRNTEEGRHWRDVFDQGLAQLDIESIMGELLFQEEV
TRH

Sequences:

>Translated_243_residues
MLCCLFATVNSAFSDTLKLTSLLWPPYSGQQLAQQGASVAVAQAAFERMEQQLVVDFYPWSRAIKLAAMPSSDYIGYFPE
YYFETDKFVFSKPIGISPLGIVEQKSHPISWHYLADLNRYTLGVVKDYVNTESLDLMIASGTQPVEAVTSDEQNIKKVAA
GRIDGAVIDVNVLYYLLKQPHLQPLADKLQVNKQLLANKQLYIAFRNTEEGRHWRDVFDQGLAQLDIESIMGELLFQEEV
TRH
>Mature_243_residues
MLCCLFATVNSAFSDTLKLTSLLWPPYSGQQLAQQGASVAVAQAAFERMEQQLVVDFYPWSRAIKLAAMPSSDYIGYFPE
YYFETDKFVFSKPIGISPLGIVEQKSHPISWHYLADLNRYTLGVVKDYVNTESLDLMIASGTQPVEAVTSDEQNIKKVAA
GRIDGAVIDVNVLYYLLKQPHLQPLADKLQVNKQLLANKQLYIAFRNTEEGRHWRDVFDQGLAQLDIESIMGELLFQEEV
TRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27487; Mature: 27487

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLCCLFATVNSAFSDTLKLTSLLWPPYSGQQLAQQGASVAVAQAAFERMEQQLVVDFYPW
CEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEEECC
SRAIKLAAMPSSDYIGYFPEYYFETDKFVFSKPIGISPLGIVEQKSHPISWHYLADLNRY
CCEEEEEECCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHH
TLGVVKDYVNTESLDLMIASGTQPVEAVTSDEQNIKKVAAGRIDGAVIDVNVLYYLLKQP
HHHHHHHHCCCCCEEEEEECCCCCHHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCC
HLQPLADKLQVNKQLLANKQLYIAFRNTEEGRHWRDVFDQGLAQLDIESIMGELLFQEEV
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRH
HCC
>Mature Secondary Structure
MLCCLFATVNSAFSDTLKLTSLLWPPYSGQQLAQQGASVAVAQAAFERMEQQLVVDFYPW
CEEEEEEHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHEEEEECC
SRAIKLAAMPSSDYIGYFPEYYFETDKFVFSKPIGISPLGIVEQKSHPISWHYLADLNRY
CCEEEEEECCCCCCCCCCCHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHH
TLGVVKDYVNTESLDLMIASGTQPVEAVTSDEQNIKKVAAGRIDGAVIDVNVLYYLLKQP
HHHHHHHHCCCCCEEEEEECCCCCHHHHCCCHHHHHHHHHCCCCCEEEHHHHHHHHHHCC
HLQPLADKLQVNKQLLANKQLYIAFRNTEEGRHWRDVFDQGLAQLDIESIMGELLFQEEV
CCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRH
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA