| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920914
Identifier: 117920914
GI number: 117920914
Start: 2957863
End: 2958732
Strand: Reverse
Name: 117920914
Synonym: Shewana3_2471
Alternate gene names: NA
Gene position: 2958732-2957863 (Counterclockwise)
Preceding gene: 117920915
Following gene: 117920912
Centisome position: 59.51
GC content: 49.66
Gene sequence:
>870_bases ATGACAACTTGGGTATTACTCAGGGGCTTAATGCGGGATAAACGCCATTGGAATGGCTTTGACCAGAGGCTAAGGCAAAG GGGCTGTACTGTTTTCACCCCAGACTTGCCCGGCAATGGGAGCCTCACTCACCAAAGCAGTCCTTTAACTATCGCTGAAT ATGCCAGCTCGGTGTGGCTACAATTGGATGAGCAATTAGCAGGACAAGCCTTTTATCTGCTGGGCTTATCGATGGGCGGC ATGCTCGCCATGGAAATGGCTAAGCAGCGCCCGGAGCAGATAAAGCACCTATTTGTATTGAATAGCAGCGCGGCTAACTT ATCGCCCTGGTATCAACGATTTAATGGATTGAATGCTCTGCGTGCTTGGCTCAATCGTTGCCGTGGTCGACAGCTTAATC CCATCGAATCGACGATTGTCCGCTTAACCAGCTATCGCCATCGGCGCGATATTGCCTTGATTGAGCGTTGGAGCCGATAT CGCCACGAGTCGACGCCATTTTTCAGCAATGCATGTCGTCAGTTGTGGGCGGCGTTTCGCTATTGTTGTCCTGCCTCTTT GCCTGTGCCCGTCAGTATTTTATCGGGTGATCGTGATGCCTTAGTGAATATTCAAACCAGTAGGGCATTAGCACAACAGT TTAAGGTCGAGTTGGTTGTCTTGGCCTATTGTGGTCATGACATCACCATAGATGCGCCAGCTAAACTGGCGCATTATCTA TTCGAAATCATAAGCCTAGAGCAAGGGGATGGGAGTGCGTCGTTTGCAGATTGTGGCGATTTGCTCGATGAGGAAACCGC CTTTCATGAGGCAAGGTTAGTGCAGTCACTGCCAAACTATTTATCAGCACTACCTACTGACGTAGAGTAG
Upstream 100 bases:
>100_bases TGGAGGCTGCGTACGCACGGGAGTTAGAAGGACTGACGCCCGAACATCTCACACGACTGGCACAGAGCGCGCAGCAGTTT TGGTATCGGGAGCATTTTTG
Downstream 100 bases:
>100_bases TGCTGAGTGATTTGCCTTACGCTTTAGCGACTATGATTACTACGCCTTCGCTACTGTGGTTATTACGCTTTCGCTACTAT GGTTTGCCCGATCGGCGTCA
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold Protein; Hydrolase; Hydrolase Or Acyltransferase-Like Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Hydrolase
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTTWVLLRGLMRDKRHWNGFDQRLRQRGCTVFTPDLPGNGSLTHQSSPLTIAEYASSVWLQLDEQLAGQAFYLLGLSMGG MLAMEMAKQRPEQIKHLFVLNSSAANLSPWYQRFNGLNALRAWLNRCRGRQLNPIESTIVRLTSYRHRRDIALIERWSRY RHESTPFFSNACRQLWAAFRYCCPASLPVPVSILSGDRDALVNIQTSRALAQQFKVELVVLAYCGHDITIDAPAKLAHYL FEIISLEQGDGSASFADCGDLLDEETAFHEARLVQSLPNYLSALPTDVE
Sequences:
>Translated_289_residues MTTWVLLRGLMRDKRHWNGFDQRLRQRGCTVFTPDLPGNGSLTHQSSPLTIAEYASSVWLQLDEQLAGQAFYLLGLSMGG MLAMEMAKQRPEQIKHLFVLNSSAANLSPWYQRFNGLNALRAWLNRCRGRQLNPIESTIVRLTSYRHRRDIALIERWSRY RHESTPFFSNACRQLWAAFRYCCPASLPVPVSILSGDRDALVNIQTSRALAQQFKVELVVLAYCGHDITIDAPAKLAHYL FEIISLEQGDGSASFADCGDLLDEETAFHEARLVQSLPNYLSALPTDVE >Mature_288_residues TTWVLLRGLMRDKRHWNGFDQRLRQRGCTVFTPDLPGNGSLTHQSSPLTIAEYASSVWLQLDEQLAGQAFYLLGLSMGGM LAMEMAKQRPEQIKHLFVLNSSAANLSPWYQRFNGLNALRAWLNRCRGRQLNPIESTIVRLTSYRHRRDIALIERWSRYR HESTPFFSNACRQLWAAFRYCCPASLPVPVSILSGDRDALVNIQTSRALAQQFKVELVVLAYCGHDITIDAPAKLAHYLF EIISLEQGDGSASFADCGDLLDEETAFHEARLVQSLPNYLSALPTDVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32748; Mature: 32617
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTWVLLRGLMRDKRHWNGFDQRLRQRGCTVFTPDLPGNGSLTHQSSPLTIAEYASSVWL CHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH QLDEQLAGQAFYLLGLSMGGMLAMEMAKQRPEQIKHLFVLNSSAANLSPWYQRFNGLNAL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEECCCCCCCHHHHHHHCCHHHH RAWLNRCRGRQLNPIESTIVRLTSYRHRRDIALIERWSRYRHESTPFFSNACRQLWAAFR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YCCPASLPVPVSILSGDRDALVNIQTSRALAQQFKVELVVLAYCGHDITIDAPAKLAHYL HHCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHEEEEECCCCEEECCHHHHHHHH FEIISLEQGDGSASFADCGDLLDEETAFHEARLVQSLPNYLSALPTDVE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTWVLLRGLMRDKRHWNGFDQRLRQRGCTVFTPDLPGNGSLTHQSSPLTIAEYASSVWL HHHHHHHHHHHHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH QLDEQLAGQAFYLLGLSMGGMLAMEMAKQRPEQIKHLFVLNSSAANLSPWYQRFNGLNAL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEECCCCCCCHHHHHHHCCHHHH RAWLNRCRGRQLNPIESTIVRLTSYRHRRDIALIERWSRYRHESTPFFSNACRQLWAAFR HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH YCCPASLPVPVSILSGDRDALVNIQTSRALAQQFKVELVVLAYCGHDITIDAPAKLAHYL HHCCCCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHEEEEECCCCEEECCHHHHHHHH FEIISLEQGDGSASFADCGDLLDEETAFHEARLVQSLPNYLSALPTDVE HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA