| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is 117920911
Identifier: 117920911
GI number: 117920911
Start: 2955898
End: 2956158
Strand: Direct
Name: 117920911
Synonym: Shewana3_2468
Alternate gene names: NA
Gene position: 2955898-2956158 (Clockwise)
Preceding gene: 117920910
Following gene: 117920913
Centisome position: 59.45
GC content: 38.31
Gene sequence:
>261_bases ATGTCAAAACCCGATACTAAAACGGCTATGCTGACCTTAATAACCCAGATTAAACAGGTTATTCCGCTCAACTTAGATGA AGCACAAATGTGCCAAGGTGAGTGTTTAGGCTGTTCTAAAAAAATGCTGGAAATGTTGGATGCTGAAATAAGCTATTGGC AATATTCAACCGATACGCCTGGATTGAAAGATCTTAAACATCTGGAAAAGATAGCTACACGCACCCACAAAATATTAAAG CGCAATAAGTTAGTTGGCTAA
Upstream 100 bases:
>100_bases ACGTGCCGAACCAAATGTGTATTCCACTAACCTAGATCAAATTAATCTGCATTTTCCCCTGCTAATATAATCACTCACTC AGTTTGTGAATGTATTTTCT
Downstream 100 bases:
>100_bases ACGCTCTCCTTATCGCCCTCACCGTATTTTCGTCTGTATCTTGGCAACATGGTTTGATTGCCTAATAGCCCACCCTGATG AATATAGAGAATGGAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MSKPDTKTAMLTLITQIKQVIPLNLDEAQMCQGECLGCSKKMLEMLDAEISYWQYSTDTPGLKDLKHLEKIATRTHKILK RNKLVG
Sequences:
>Translated_86_residues MSKPDTKTAMLTLITQIKQVIPLNLDEAQMCQGECLGCSKKMLEMLDAEISYWQYSTDTPGLKDLKHLEKIATRTHKILK RNKLVG >Mature_85_residues SKPDTKTAMLTLITQIKQVIPLNLDEAQMCQGECLGCSKKMLEMLDAEISYWQYSTDTPGLKDLKHLEKIATRTHKILKR NKLVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9779; Mature: 9648
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPDTKTAMLTLITQIKQVIPLNLDEAQMCQGECLGCSKKMLEMLDAEISYWQYSTDTP CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC GLKDLKHLEKIATRTHKILKRNKLVG CHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKPDTKTAMLTLITQIKQVIPLNLDEAQMCQGECLGCSKKMLEMLDAEISYWQYSTDTP CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCC GLKDLKHLEKIATRTHKILKRNKLVG CHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA