| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is mltB [H]
Identifier: 117920823
GI number: 117920823
Start: 2860378
End: 2861379
Strand: Reverse
Name: mltB [H]
Synonym: Shewana3_2380
Alternate gene names: 117920823
Gene position: 2861379-2860378 (Counterclockwise)
Preceding gene: 117920824
Following gene: 117920822
Centisome position: 57.55
GC content: 48.9
Gene sequence:
>1002_bases ATGCCAAAGACCCTCCTTCAACGCGTTGCAGCATGTACATTGATTTTCTTGCCCTTGATAAGCCATAGCGCGCTAGGGCA AGACGCCTCCTTCAACGATTACCTCCTTAAGCTTAAGCAAGAGGCGAGTGCCCAAGGCATTAGCCAAGCGACGATCAATA CGGCTTTTCCGCAGATAAAACGCTTTAAAAAAGCCAATGTGGCCGCAGCGCCAAGCCAATCTAAAACCCTTGAAACCTAT TTGCCAGAAGTGGTGCCGGAATGGAAGGTGGATACGGCGCGCGTACTCTTTAACGAGCATGAAGTGCTATTGAGCAATAT TGCCGACAAGTATCAAGTGCAGCCGCGGTTTTTAGTGGCGCTCTGGGGCTTAGTGTCTAACTTTGGGGATGCGTCGGGGG ATTATCCTGTACTGTCTGTGATGGCGTCGTTAGCCTTTACTGGCGAAGATACGGCGCGTTACCAACGGGAGTTTATGGCT GCGCTTTCCATCATGGATAAAGAGCAACTTAAGTTTGATGATCTTAAAAGCAATGACAAAGGCTTTATGGGGCAAACCCA ATTGCTACCGAGTGAATATTTAGCCTACGGCCAAGATGGCGACGGTGATGGTAAAAAAGACATTTGGCATAATGTGGCCG ATGCGTTTGCCTCTGCCGCGAATCTGCTTAAGCAGCAGGGCTGGAATGGTGAAGATACTTGGGGACGTCAGGTTCAAGCA CCGGCGGATATTAAGACCGAGTTTATCGGACTCAATCAATCACAGACCCTAGCCAAGTGGCAACAGCTCGGTGTCAGGCG GTTCGATAATACGGATTTACCGAATCGTGAGGATATTCATGCTTCGCTTATCATGCCCGACGGTGTTAAGGGCCGAAAAT ATCTGGTCTATGGCAATTACCGCGCCTTAATGCACTGGCAAGCGGTGAATTATTTAGGCGAGGGCGATTATTTTGGCATC TCTGTGGTGCATTTATCGGAGAGAATTAAGACTCCCCAGTAA
Upstream 100 bases:
>100_bases TTTTTATTTACAAATTCCGCCACCGCAGGTTAATTTATTGGCCGAACACAGAGAAAGCCTTGGGATTAAAGACTAGCCCA TAAACTGCGGACAAAGGTAT
Downstream 100 bases:
>100_bases ATTGGTGTAAAATGGCCCGCATTAAGCGGGTTTTTTATATGAAGATAAGCGTAAACATGGCATTTTGGCAGAATAAAGCG TTAACCGAGTTGACGTCGCA
Product: putative transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPKTLLQRVAACTLIFLPLISHSALGQDASFNDYLLKLKQEASAQGISQATINTAFPQIKRFKKANVAAAPSQSKTLETY LPEVVPEWKVDTARVLFNEHEVLLSNIADKYQVQPRFLVALWGLVSNFGDASGDYPVLSVMASLAFTGEDTARYQREFMA ALSIMDKEQLKFDDLKSNDKGFMGQTQLLPSEYLAYGQDGDGDGKKDIWHNVADAFASAANLLKQQGWNGEDTWGRQVQA PADIKTEFIGLNQSQTLAKWQQLGVRRFDNTDLPNREDIHASLIMPDGVKGRKYLVYGNYRALMHWQAVNYLGEGDYFGI SVVHLSERIKTPQ
Sequences:
>Translated_333_residues MPKTLLQRVAACTLIFLPLISHSALGQDASFNDYLLKLKQEASAQGISQATINTAFPQIKRFKKANVAAAPSQSKTLETY LPEVVPEWKVDTARVLFNEHEVLLSNIADKYQVQPRFLVALWGLVSNFGDASGDYPVLSVMASLAFTGEDTARYQREFMA ALSIMDKEQLKFDDLKSNDKGFMGQTQLLPSEYLAYGQDGDGDGKKDIWHNVADAFASAANLLKQQGWNGEDTWGRQVQA PADIKTEFIGLNQSQTLAKWQQLGVRRFDNTDLPNREDIHASLIMPDGVKGRKYLVYGNYRALMHWQAVNYLGEGDYFGI SVVHLSERIKTPQ >Mature_332_residues PKTLLQRVAACTLIFLPLISHSALGQDASFNDYLLKLKQEASAQGISQATINTAFPQIKRFKKANVAAAPSQSKTLETYL PEVVPEWKVDTARVLFNEHEVLLSNIADKYQVQPRFLVALWGLVSNFGDASGDYPVLSVMASLAFTGEDTARYQREFMAA LSIMDKEQLKFDDLKSNDKGFMGQTQLLPSEYLAYGQDGDGDGKKDIWHNVADAFASAANLLKQQGWNGEDTWGRQVQAP ADIKTEFIGLNQSQTLAKWQQLGVRRFDNTDLPNREDIHASLIMPDGVKGRKYLVYGNYRALMHWQAVNYLGEGDYFGIS VVHLSERIKTPQ
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=199, Percent_Identity=30.1507537688442, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 37244; Mature: 37112
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTLLQRVAACTLIFLPLISHSALGQDASFNDYLLKLKQEASAQGISQATINTAFPQIK CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RFKKANVAAAPSQSKTLETYLPEVVPEWKVDTARVLFNEHEVLLSNIADKYQVQPRFLVA HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LWGLVSNFGDASGDYPVLSVMASLAFTGEDTARYQREFMAALSIMDKEQLKFDDLKSNDK HHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC GFMGQTQLLPSEYLAYGQDGDGDGKKDIWHNVADAFASAANLLKQQGWNGEDTWGRQVQA CCCCCHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PADIKTEFIGLNQSQTLAKWQQLGVRRFDNTDLPNREDIHASLIMPDGVKGRKYLVYGNY CCCCHHHEECCCCHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECH RALMHWQAVNYLGEGDYFGISVVHLSERIKTPQ HHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCC >Mature Secondary Structure PKTLLQRVAACTLIFLPLISHSALGQDASFNDYLLKLKQEASAQGISQATINTAFPQIK CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RFKKANVAAAPSQSKTLETYLPEVVPEWKVDTARVLFNEHEVLLSNIADKYQVQPRFLVA HHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LWGLVSNFGDASGDYPVLSVMASLAFTGEDTARYQREFMAALSIMDKEQLKFDDLKSNDK HHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC GFMGQTQLLPSEYLAYGQDGDGDGKKDIWHNVADAFASAANLLKQQGWNGEDTWGRQVQA CCCCCHHCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC PADIKTEFIGLNQSQTLAKWQQLGVRRFDNTDLPNREDIHASLIMPDGVKGRKYLVYGNY CCCCHHHEECCCCHHHHHHHHHHCCHHCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECH RALMHWQAVNYLGEGDYFGISVVHLSERIKTPQ HHHHHHHHHHHCCCCCCCEEEEEEEHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]